Vigna angularis (adzuki bean): 108329010
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Entry
108329010 CDS
T04660
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108329010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108329010
Membrane trafficking [BR:
var04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108329010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
108329010
NCBI-ProteinID:
XP_017418460
UniProt:
A0A8T0L173
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All DBs
Position
2:complement(48261797..48272685)
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AA seq
1034 aa
AA seq
DB search
MGTENPGRPTFPSRPSPPPFPAAHTVTPFSSTGSVVGSEPPSFRPAPPAPSSQAASPFSS
AGPAAAGPGAPGFRPAPPGRFNDPSVPPPPQPSNAPLAAGPFQQFPAPPFPPTMQPRAPP
PSMGQQSIQSSAPNLAPPFPTSLPAQPQMPFVPMGSPPPQSAAAPAHMGSNVPPHMGSNV
PPRTFQPSFPGYPSKQTGPDMQGPPMHSSFPANQGNFGTVPPAGASPFLSHQGGYVPSLQ
VAPPPGIQPMQQQPGSAPHIGAVQGLAEDFNALTMQTRPGTMDPLFDPKELPRPLEGDIE
PKNLADMYPMNCNPRFLRLTTSAVPSSQSLASRWHLPLGAVVSPLAEPPDGEEVPIVNFA
PASVVRCRRCRTYVNPYMTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDIHQRPE
LTKGTVEFVAPAEYMVRPPMPPVYFFLIDVSISAVRSGMIEVVANTIKSCLDELPGFPRT
QIGFATFDSTIHFYNMKSSLTQPQMLVVSDLDDIFIPLPDDLLVNLSESRSVVETFLDSL
PTMFHDNVNLESAFGPALKAAFMVMSQLGGKLLIFQNSLPSLGVGRLKLRGDDSRVYGTD
KEHGLRLPEDPFYKQMAAEFSKYQISANVYVFSDKYTDVASLGTLAKYTAGQVYFYPAFQ
SAIHGDKLRHELRRDLTRETAWEAVMRIRCAKGVRFTTYHGNFMLRSTDLLALPAVDCDK
AFAMQLSLEETLLTTQTMYFQVALLYTASCGERRIRVHTMAVPVVTELADIYRLADSGAI
VSLLSRLAIEKTLSQKLEDARTAVQLRIVKALREYRNLYSVQHRLANRMIYPDSLKFLIL
YGLALCRSTALRGGYGDVPLDERCAAGHIMMTVSIKVLLKLLYPSLIRLDEYLMKASMQA
DDLKSVERSLPLTGESLDSRGLYLYDDGFRFIIWFGRVISPDIAKNLLGPDFAAELSKTT
LSEHDNEMSRRLMKLLEKLRNKDRAYYQLCHLVRQGEQPKEGFLFLSNLVEDQMGGNSGY
AEWMLQISRQVQQS
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggggactgaaaatcctggtcgtccaacctttccttcaaggccttctccaccgcctttt
cctgctgcacatacagtgacacccttttcatcaaccggttccgtggttggatcagagcct
ccttcttttcggcccgctcctccagctccttcttcgcaagccgcctctccattttcctca
gcaggacctgctgcagctggaccaggggcacccggttttagacctgcaccaccagggagg
ttcaatgatccttcagtgcctcctcctcctcaaccatccaatgccccgctagctgctgga
ccctttcagcagtttccggcaccgcccttccccccgacaatgcagccacgtgcacctccg
ccgtctatgggacaacaatcaattcaatcttctgcacctaatctagcaccgccgtttccc
acgtctcttccagctcagccacagatgccttttgtcccaatgggatctcccccacctcaa
agtgctgctgctcctgcgcacatgggttcaaatgttcctccgcacatgggttcaaatgtt
cctccgcgtacatttcagccatcttttcctgggtacccgagtaagcagactggtcctgat
atgcaaggtccacccatgcattcctctttccctgctaatcaaggaaattttgggactgtt
ccacctgctggagcttctccttttttgtctcatcaaggaggttatgttccatcactccaa
gtggctcctccgcctggtatccagccaatgcagcagcaacctggatctgcgccccatata
ggtgctgttcagggcttggcagaagacttcaatgccctcacaatgcaaactcgtcccgga
acaatggatccattatttgaccccaaggaacttccaaggccattggaaggtgatattgag
ccaaagaatttggctgacatgtatcccatgaactgcaatccccggtttctacgactcacg
actagtgccgtaccaagctcccagtccttggcttctaggtggcaccttccacttggagca
gttgtttctccgcttgctgaaccccctgatggggaagaggtgcctatagttaattttgcc
ccagctagtgttgttcgctgcagaagatgtcgcacatatgtgaatccttatatgacattt
acagaagcaggaagaaagttccgttgcaacgtttgtaccttgcttaacgatgttcctagt
gaatattatgcacaactagatgccactggaaaaagagttgatatacatcaacggcctgag
cttacaaaggggactgtggaatttgtggcccctgctgagtatatggtgcggcctcctatg
ccaccagtgtatttcttcctcatcgatgtttccatatctgcagttagaagtggcatgatt
gaggttgtggccaatacaatcaagtcatgcttggatgagcttcccggctttccacgtacc
caaattgggtttgcgacttttgacagcacaatacacttttataacatgaagtcttccctg
actcaaccgcagatgctggtagtgtcagatctggatgatatatttattccgctgccagat
gatcttcttgttaacttgtctgaatcaagaagtgtggtagaaaccttcctagatagtttg
ccaacgatgttccatgacaatgttaacttggaatcagcttttggtcctgctcttaaggct
gcattcatggttatgagtcaactcggagggaaattgttaatatttcaaaactcactccca
tctcttggtgttggccgtttgaagttacgtggagatgattctcgtgtttacgggactgac
aaagaacatggactgagactgccagaagatccattttataaacaaatggctgctgagttt
tccaagtaccaaatatcagcaaatgtttatgtattcagtgataagtacacagatgtagcc
tccttgggaactctggcaaaatatactgctggtcaagtgtatttctatccagctttccaa
tcagctattcatggggataaattgagacatgaattaaggagagaccttaccagagaaact
gcatgggaagctgtaatgcgtattagatgtgcaaaaggtgttcgcttcacaacttatcat
ggaaactttatgctaaggtccactgatttgttagcacttcctgctgtagattgtgataaa
gcctttgctatgcagttatcacttgaagagacattattgacaactcagacaatgtatttc
caagttgcattgctttatacagcatcttgcggggaaaggcgaataagagtacacacaatg
gcagttccagtagttacggagttggcagatatctatcgtttggctgatagtggtgctatt
gtatcgctgttaagtaggctagcaattgagaaaacattatcccaaaagttggaagatgca
cggactgctgttcaactaagaattgtgaaagcccttagggaatatcggaatctttattct
gtgcaacatcgcttggccaacagaatgatatatcccgactctctaaagttcctaatttta
tatggattagccctgtgtagatcaacagctctacgtggaggatatggtgatgttccactg
gatgaacgatgtgcggcaggacacataatgatgactgtatcaataaaagtactgttgaaa
cttctctatcctagtttgattcgacttgatgaatatcttatgaaggcatctatgcaggct
gatgacttaaaaagtgttgagagaagtttacctttgacaggggagagcttagattctagg
ggcctttatttgtatgatgacggtttccggttcattatatggtttggtagggtgatttca
ccggacatagccaaaaatttacttggaccagactttgcagcagaattatcgaagactaca
ctcagtgagcatgacaatgaaatgtcaaggagattgatgaagttacttgagaagttgaga
aataaagatcgtgcttattaccagttatgccaccttgtgaggcaaggtgaacagcccaaa
gaaggattcctctttctttcaaacctcgttgaggaccagatgggtggtaacagtgggtac
gctgaatggatgttacagatatcccggcaagtgcagcaatcataa
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