Vigna angularis (adzuki bean): 108329057
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Entry
108329057 CDS
T04660
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
var00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
108329057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108329057
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108329057
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_NXF1-5
LRR_8
Motif
Other DBs
NCBI-GeneID:
108329057
NCBI-ProteinID:
XP_017418534
UniProt:
A0A0L9U9U4
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Position
2:complement(49934148..49941815)
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AA seq
586 aa
AA seq
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MQRMAYTFSFPEEVLEHVFSFIESERDRNAISLVCKSWYEIERWCRRNVFVGNCYAVSPV
MVIKRFPELRSIALKGKPHFADFNLVPEGWGGYVCPWIAAMACAFPCLEEIRLKRMVITD
ESLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRNLKELDLQESEVDDLSGHWLSHF
PDSYTSLVSLNISCLGNEVSLSALERLLGRCPNLRTLRLNRAVPLDRLPNLLRRCPQLVE
LGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAVYPICSRLTSLNLSYA
IIQSPDLIKLISQCPNLLRLWVLDYIEDAGLYNLAASCKDLRELRVFPSDPFGLEPNVAL
TEKGLVSVSEGCPRLQSVLYFCRQMSNAALFTIAQNRPNLTRFRLCIIEPRTPDYLTHEP
LDSGFGAIVEHCKDLQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGESDLGLHHVLSG
CDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVID
ERGPPDSRPDDCAVEKLYIYRTVAGPRLDMPGFVWTMEDNSSLRLE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcagagaatggcctacacgttctcgtttccggaggaggtgctggagcacgtgttctcc
ttcattgagagcgagagggaccggaacgcgatctctctggtgtgcaagtcgtggtacgag
atcgagcggtggtgcaggaggaatgttttcgtcggtaactgctatgcggtgagccctgtg
atggtgatcaagcggttcccggagttgagatccattgcgctcaaggggaagccgcacttc
gcggacttcaacttggtccccgagggttggggcggttatgtctgtccctggatcgccgcc
atggcctgcgccttcccctgcctcgaagagatcagactcaagaggatggtcatcaccgac
gagagcttggaactcatcgccaagtccttcaaaaacttcaaggtgcttgttctcacttca
tgtgagggtttcaccactgacggactggccgccattgctgccaactgcaggaatttgaag
gagttggacctgcaagagagtgaagtggatgaccttagtgggcactggctaagccatttt
cctgattcctacacgtcactagtgtcactgaacatctcttgcttaggcaatgaggtcagt
ttatctgcactggagcgtctgcttgggaggtgtcccaacctgcggaccctgcgcctcaat
cgtgctgtgccccttgatagactacccaatctacttcgtcgttgtcctcagctggttgag
ttaggcactggagtctactcaactgagatgcgaccagaggtcttctcaaacctggaagcc
gcattttctgggtgcaagcagttgaagagcttgtctggtttttgggacgtcctcccatcg
tacctcccagctgtctaccccatctgctccaggctaacatcgttaaacttgagttatgct
attattcagagccctgatcttattaagcttatcagtcaatgtccaaatttgttgcgtttg
tgggttctggattacatagaagatgctggtctttataaccttgctgcatcatgtaaggat
ttaagggagttaagggtgtttccgtctgacccattcggtttagaaccaaatgttgcattg
acagaaaagggccttgtctctgtgtctgaaggttgcccccggctccaatcagttctatat
ttttgtcgtcaaatgtctaatgcagccctgttcacaattgcgcagaacaggcctaatttg
actcgttttaggctttgtatcatcgagcctagaacgcccgactatcttacgcatgagcca
cttgattctggttttggagccattgtagaacattgcaaggatcttcaacgcctatctcta
tctggtcttcttacagatcgtgttttcgagtatattgggacttacgggaagaagctggag
atgctatctgtggcttttgctggagaaagtgatctgggacttcatcatgtgctgtctggg
tgtgataatcttaggaagctggagatcagggactgccccttcggtgacaaggcgcttttg
gcaaatgctgcaaagctggagacaatgcgatccctttggatgtcctcctgctcagtgagt
tatggagcatgtaagctactgggtcagaaaatgcccagactcaacgttgaagtcattgat
gaaagaggacctccagattctaggccggatgattgtgctgttgagaagctttatatttac
aggactgttgccgggccaaggttggacatgcctggttttgtgtggacaatggaagataat
tcttcgctaaggcttgagtga
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