Vigna angularis (adzuki bean): 108329125
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Entry
108329125 CDS
T04660
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108329125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108329125
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
SR proteins
108329125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Motif
Other DBs
NCBI-GeneID:
108329125
NCBI-ProteinID:
XP_017418661
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All DBs
Position
2:49615109..49620217
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AA seq
295 aa
AA seq
DB search
MSRRSSRTVYVGNLPGDIREREVEDLFLKYGHITHIDLKVPPRPPGYAFVEFEDAQDAED
AIRGRDGYDFDGHRLRVEPAHGGRGHSSSRDRHSSHSNGRAGRGVSRRSEYRVLVTGLPS
SASWQDLKDHMRKAGDVCFSQVFHDGRGTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKG
FVRVREYDSRRDSSRSPSRGPSHSRGRSYSRSRSYSRDRSQSKSPKGKSSQRSPPAKSPS
RSPAARSRSRSKSRSLSGSRSRSRSPLPSRNKSPKRRSASRSPSRSRSRSKSLSR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagtagacgctcgagcagaactgtctacgttgggaaccttcctggtgacatccgtgaa
agagaagttgaagatttatttctgaagtatggacacataactcacatagatctaaaggtt
cccccaagaccccctggttacgcatttgtagagtttgaagatgctcaagacgctgaggat
gcaatacgtggacgtgatggctatgattttgatgggcaccggttacgggtggagcctgcc
catggtggacgtggtcattcatcctcaagagatcgacacagcagtcacagcaatggacgg
gctggacgtggggtatccagacgctctgaatatcgggttctagtcactggattgccctct
tcagcatcctggcaggatcttaaggatcacatgcgcaaggcaggagatgtttgcttttcc
caggtctttcatgatggaaggggtactactggtattgtggattacacaaattatgatgat
atgaaatatgctatcaagaagcttgatgactctgagtttcggaatgcattttccaagggt
tttgttcgagtgagggaatatgattcaagacgggattcatctagaagtcctagccggggc
ccatctcattctagaggaagaagctatagccgaagccgtagttacagtcgggaccggagc
caaagcaaatctccaaagggtaaatcatcacagcgttcaccacctgctaaatctccatca
agatctcctgctgcccggtctcgttcaagatcaaagtctcgttcgttgtcaggatcacgg
tcgaggtccagatctccattgccctctcgtaataaaagtcccaaaaggcgcagtgctagc
aggagtccgagtaggagcagaagcaggagtaaaagtttgtctcggtga
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