Vigna angularis (adzuki bean): 108329148
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Entry
108329148 CDS
T04660
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108329148
09122 Translation
03013 Nucleocytoplasmic transport
108329148
03015 mRNA surveillance pathway
108329148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108329148
03041 Spliceosome [BR:
var03041
]
108329148
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108329148
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
Cap binding complex
108329148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF745
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
108329148
NCBI-ProteinID:
XP_017418698
UniProt:
A0A8T0KZR7
LinkDB
All DBs
Position
2:30646871..30670421
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AA seq
862 aa
AA seq
DB search
MSSWKNLLLRIGDKSPEYGVSSDYKDHIDTCFGALRRELDHSHTDVLEFLLTCAEHLPHK
IPLYGTLIGLINLENEDFGKQLVEKTKTMFQDALDTGNCNGVRVLMRLLTVMMCSKVLQP
SSLVAVFETFLSLAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELTEQVPEDIDRV
MVGVEAYLSIRKHTSDTGLSFFENDDENGEGISDKDFLEDLWDRIQALSTRGWKVESVPR
PHLSFEAQLVAGKSHEFGPISCPSLPEPPSVPSGVSTGKQKHEAELKYPQRIHRLNIFPP
SKHEDIQPIDRFVMEEYLLDVLLFFNGCRKECASFMVGLPVSFRYEYLMAETIFSQLLML
PQPPFRPVYYTLVIIDLCKALPGAFPAVVAGAVRTLFERIADLDMECRTRLILWFSHHLS
NFQFIWPWEEWAYVLELPKWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPRLEELLPPK
SGPNFSFGSEDGKESNEHALSGKLNGMVKGKSPVREIISWIDESVLPNNGLEVTLRVIVQ
TLLNIGSKSFTHLITVLERYAQVFAKVCPDEDRQVMLIAEVSSFWKSNTQMTAIAIDRMM
GYRLVSNLAIVRWVFSAENIEQFHTSDRPWEILRNAVSKTHNRISDLRKEILTIKKNISS
AEEAAKEAKAELDAAESKLTLVDGEPVLGDNPVRLNRLKSHAEKATEDVLTVKESLESKE
ALLVRAIEENEALFLLLYKSFSNVLTERLPEGTRTLHELKSVQVDVMAVDAEEPPTMELD
DENQRSQNSQSNGEKKGGAYVVGEKEQWCITTLGYVKAFSRQYAAEIWPHVEKLDAEVLT
EETPYLFRSAVYTGLRRPIHEA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttggaaaaaccttcttctacgaatcggtgacaagagtcccgaatacggagtc
tcctctgactataaagatcacattgatacgtgctttggcgcccttcgtcgcgaacttgac
cactcccataccgatgttttggagttccttctcacgtgtgctgaacatttgcctcacaag
attcctctgtatggaaccctgattggcttgattaacttggaaaatgaggactttgggaag
caactagtggagaaaactaaaaccatgtttcaggatgccttggatactggaaactgcaat
ggggttcgagttctaatgcggcttttgactgttatgatgtgcagtaaggttcttcaaccc
agctccttggtggctgtctttgaaacatttttatccttagctgccacaacagtagatgag
gaaaaaggcaatcccttatggcagccttgtgcagacttttacatcacttgcattttatca
tgccttccatggggcggagcagaacttactgagcaagttcctgaagatattgatagagtg
atggtcggtgtagaagcttacttgagcatcagaaagcatacatctgatactggcttatcc
ttttttgagaatgatgatgaaaatggggaaggtattagtgacaaggattttttagaagat
ttatgggatagaatacaggctctatcaacgaggggatggaaagttgaaagtgttccaaga
cctcatctttcatttgaagctcaattggttgctgggaagtctcatgaatttgggccaata
agctgccccagcctaccagaaccaccttcagtcccttctggcgtgtctactggtaaacag
aagcatgaagctgaattaaaatatccacaaaggatacaccggttaaatatatttcctccc
agtaaacatgaggatatacaacctatagacagatttgttatggaagagtatctcctagat
gtgcttctgttcttcaatggctgtcgaaaggagtgtgcatctttcatggttggtttgcct
gtttccttcagatatgagtacctcatggccgagacaatattctctcagttgctgatgcta
cctcaaccacctttcagaccagtatattacacacttgtaattattgacctttgcaaggct
cttcctggagcttttcctgctgttgttgctggagcagttcgtactctctttgagaggata
gctgatttggatatggaatgccgaacacgtctaatcctttggttctcccaccatttatca
aacttccagtttatctggccatgggaagagtgggcttatgtcctagagctcccaaagtgg
gctccacaacgtgtctttgtccaagaggttttggagagggaagttcgcttgtcatactgg
gacaaagttaagcagagtattgaaaatgcacctcgtttggaagaattgcttcctcctaaa
agcgggccaaattttagttttggttcagaagatggtaaagaaagcaatgagcatgcactg
tctggaaagctcaacggcatggttaaagggaagtcacctgtccgtgaaataatctcttgg
attgatgaaagtgtgcttccaaataatggtctagaagttaccctcagagtgattgtacaa
actcttctcaatattggatccaagagtttcacgcatttgataactgtcttggagagatat
gcacaagtctttgcgaaagtatgtccggatgaggatcgacaagtcatgctgatagctgaa
gtgagttctttctggaagagtaacacccaaatgacagcaatagctattgacaggatgatg
ggttatcgacttgtatcaaatctggctattgtgagatgggtcttctcagcagaaaatatt
gagcaatttcatacatcggatcgtccatgggagattctgagaaatgcagtaagcaagaca
cataatcgtatttctgatttacggaaagaaatattaactattaaaaagaacatttcatct
gccgaagaagctgccaaggaggcaaaagctgagctagatgctgcagagtcaaaacttaca
cttgtggatggtgaaccagttcttggtgacaatcctgttagattgaatagattgaaatca
catgctgaaaaggcaacggaggacgtgctgactgttaaagaatccttagaatctaaggaa
gctcttcttgtccgagcaattgaggaaaatgaggcattatttctcttgttgtacaaaagc
ttctcaaatgtgttgacagagcggcttcctgaaggaactagaacactgcatgagttgaag
tctgtgcaagtagatgtgatggcagtggacgctgaagagccaccaacaatggaattagat
gacgaaaaccagagatctcaaaacagtcagtcaaatggagagaagaaaggtggtgcttat
gttgtaggtgaaaaggagcagtggtgtatcaccactttgggctatgtgaaggctttttct
aggcagtatgctgctgagatatggccccatgttgaaaagttggatgcagaggtattgaca
gaagaaacaccttatctttttaggtcagctgtttatactggtcttcgaagaccgattcac
gaggcatga
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