Vigna angularis (adzuki bean): 108329165
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Entry
108329165 CDS
T04660
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var00040
Pentose and glucuronate interconversions
var01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
var00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108329165
Enzymes [BR:
var01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
108329165
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
108329165
NCBI-ProteinID:
XP_017418734
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Position
2:complement(51937886..51940501)
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AA seq
405 aa
AA seq
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MAFSFTFTFHLLLLVPSVVYVYTSPVQDPELVVQEVEKSINGSRRKLGYLSCGTGNPIDD
CWRCDPNWERNRKRLANCGIGFGKNAIGGRDGKLYVVTDPSDNPMNPKPGTLRHGVIQEE
PLWIIFKRDMVIKLHMDLLVNSYKTIDGRGATIHIAGGPCIKVHNKRNIIIHGIHIHHCK
RGGSGYVSDFPNHRTWSARSDGDGITISGGSHVWVDHCSLSNCFDGLIDVVHGSTAITIS
NNYMTHHNKVMLLGHSDSYKDDKNMQVTIAFNHFGEGLGGRMPRCRFGYFHVVNNDYIHW
QHYAIGGSSSPTIFSQGNRFLAPNDEDHKEVTKHFKSSEGEWKKWNWRSEGDLMLNGAFF
TPSGAGATARYDRASSMAARPPLLVPSMTAGAGALRCKNGHLCGH
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcattttcattcacctttacattccaccttttgcttcttgtcccatctgtggtttat
gtgtatacttctcctgttcaagatcctgaattagtggtccaggaagtggaaaagagcatt
aatggctcaaggagaaagttggggtacctttcttgtggtacggggaaccccattgatgat
tgttggaggtgcgaccccaactgggaaaggaatcgcaagcgtttagctaattgtggtatt
gggttcggcaagaatgccattggtggaagagatgggaaactatacgtggtgactgacccc
agtgataaccctatgaaccctaaaccaggtacattgagacatggtgttatccaagaagag
cctttgtggatcattttcaagcgtgacatggtgatcaagctacacatggatctccttgtt
aattcttacaaaaccattgacggaagaggagcaactatccacattgctggagggccttgc
attaaagtgcacaacaagaggaatatcataattcatggcatacacattcatcattgcaaa
cgaggtgggagtggatatgtgagtgattttcctaaccatcgcacttggagtgcaagatcg
gacggtgatgggatcacaatctctggtgggagtcatgtttgggtggaccattgctccttg
tcaaactgttttgatggcctgattgatgttgttcatggttcaacggccatcaccatttcc
aacaattacatgacacaccataacaaggtcatgctcttgggccacagtgattcctataaa
gatgataagaatatgcaagtcaccatagccttcaaccattttggagaagggctaggagga
agaatgcctagatgcaggtttggatactttcatgtggtgaacaatgattacatacattgg
cagcattacgcaataggtgggagttcatccccaactattttcagccaaggcaatagattt
cttgccccaaatgatgaagaccataaagaggtgaccaaacattttaaatcatcagaagga
gagtggaagaaatggaattggaggtctgaaggagatctaatgttgaatggcgccttcttc
acaccgtcaggggctggagcaacagctagatatgatagagcgtcaagcatggcagcaaga
ccacctctacttgtgccttcaatgacggcaggggctggtgcacttagatgcaaaaatggc
cacctgtgcggacactag
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