Vigna angularis (adzuki bean): 108329179
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Entry
108329179 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108329179
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108329179
09122 Translation
03013 Nucleocytoplasmic transport
108329179
03015 mRNA surveillance pathway
108329179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108329179
03041 Spliceosome [BR:
var03041
]
108329179
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108329179
Spliceosome [BR:
var03041
]
Complex C
Other components
EJC/TREX
108329179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
108329179
NCBI-ProteinID:
XP_017418754
UniProt:
A0A0L9UA78
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Position
2:complement(51279642..51283477)
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AA seq
712 aa
AA seq
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MSPKYQTPPKYQTLDNRPVNQWKVTELREELRRRRLNTKGLKDDLVKRLDECLRLEREGE
QDSEKEEANGFDDVHVDGEKGSAAVTMDAEVVDATDKESTQTFETAEKGKSDVVEPIETE
NEEMFPGVVDEDSNKNDKQDDITGQVDINNSVSTMDEEVEHEGFPSGVYSGNVVEEVAST
HASAVETTITVTESVVTGLVVSGEDSYCAEKNNEFSAAKLENEESKAQLDGEDTKPQLDS
ETKPLHEDIVPDSSVPENQVSEVNPSLGSQVKSDSISTDSVSINQKNELKDTIITDNVKL
EQDIVKPEMVEEPSSRNDVPVSYDVPVGGRHEKKTSVEENINNVSSPDLNKTNSSDDVGY
PEKLNLDRSSGDDSMEEDLPETKQIDSKFNVDELRKKVESIEEPIVKEESRTIAVGDGVS
GGKNDTHQDIDISPVAPTEKRKFHEQTSVGNNEPAKRQRRWNTETVKSPDSQSTTPRPAT
TPREEPIPQKRNLSRSDSSATDDTPKERIVPPSPRSPTNSLRIDRFLRPFTLKAVQELLG
KTGNVSSFWMDQIKTHCYVTYSSVEEAMETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMK
LESPVQTAPISTAPVVPPVVPTSQPEPSPRLHREQHSVPTMLPPPPPLSKNPPVARDRLP
SPPPLPEKVDPPIVTLDDLFRKTISTPRIYYLPLSEEQVAAKLAAQGKSVRQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaaaatatcagactccgccaaaatatcagactctggacaatcgtccagttaat
cagtggaaggttacggagctgagagaggagctgaggaggaggaggttaaacaccaaaggt
ctgaaggatgatttggtaaagcggttggatgaatgtcttcgtcttgaaagggagggtgag
caggattctgagaaggaggaggccaatggttttgatgatgttcatgtagacggggaaaaa
ggttctgcggctgttactatggatgctgaagtcgttgacgcaactgacaaggaaagtacc
caaacatttgagactgctgaaaaggggaagagtgatgtagttgaaccgatcgaaacagaa
aatgaggaaatgtttccgggggttgtggatgaagacagcaataagaatgacaagcaggat
gatattactggccaagttgacattaataatagtgtgtcaaccatggatgaagaagttgaa
cacgagggctttccctccggtgtatattctggaaatgtggtagaggaggtggctagtact
catgcttcggctgtagagacgacaattacagttactgaaagtgtagtaacaggtttggta
gtcagtggtgaggattcatactgtgcagaaaagaacaatgagttttctgcagcaaagcta
gagaatgaggagtcaaaggcgcagctggatggtgaggatacaaagccccaactggattct
gagacaaagcccctgcacgaggatattgtgcccgactcttctgttcccgaaaaccaggta
tctgaggtcaaccctagtttagggtctcaagtaaaatctgattctatttctactgattct
gtgtcaattaatcaaaagaatgaactaaaggatactataattactgataatgtcaaatta
gaacaagatattgttaagccggagatggtggaagaaccatcatccagaaatgatgtacct
gtttcttatgatgtacctgttggagggcggcatgagaaaaagacatctgttgaagaaaat
atcaataatgtttcaagtccagacttgaataagaccaatagcagtgatgatgtggggtat
ccagaaaagttgaatttagacagaagttctggtgatgattccatggaagaggatttgcct
gagactaagcaaattgattctaagtttaatgttgatgaacttagaaagaaagtggagagt
attgaagagcctattgtgaaggaggaaagtaggactatagctgtgggagatggtgtatct
ggaggaaaaaatgatacccaccaagatattgacattagtcccgttgccccaactgagaaa
cgaaaattccatgaacaaacatcggttgggaacaatgagcctgcaaaaaggcaacgcagg
tggaacactgaaacagttaaaagtccagattcacaaagcactactcccaggcctgctact
acacctagagaagagccaattcctcagaaacgcaacctctctaggtctgattcctctgct
actgatgacacacctaaagagcgcattgttccaccatcaccaaggtccccaactaattcc
ctcaggattgatcgattcctccgtccatttactctgaaagctgtacaagaacttcttggt
aagactgggaatgttagcagtttctggatggaccagataaagacccattgctatgttact
tactcatctgttgaagaagccatggagacacggaatgctgtgtataatttgcaatggcca
ccaaatggtgggcgtctcttagttgctgagtatgttgatccggaagaagtgaaaatgaag
ttagaatctcctgtacagactgcccccatcagcactgctccagtagttccgcctgtggtc
ccaacatcacagccagagccttcccctcggctgcacagggagcagcattcagttccaact
atgctcccacctccaccaccattgtcaaaaaacccaccagtagcaagagatcgacttcca
tcaccaccacctcttccagagaaagttgacccacctattgtcactcttgatgatctcttc
cgcaaaaccatatcaactcctcggatctactacttgcctttgtccgaagagcaagttgct
gcaaaacttgctgcacagggtaaaagtgtgaggcagtag
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