Vigna angularis (adzuki bean): 108329183
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Entry
108329183 CDS
T04660
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108329183
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108329183
Enzymes [BR:
var01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
108329183
Protein phosphatases and associated proteins [BR:
var01009
]
HAD phosphatases
Fcp/Scp phosphatases
108329183
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
108329183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
dsrm
DSRM_2
Motif
Other DBs
NCBI-GeneID:
108329183
NCBI-ProteinID:
XP_017418760
LinkDB
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Position
2:16855068..16863571
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AA seq
836 aa
AA seq
DB search
MSRLGFKHEVYDGDKHVGELDVFPTTPFHNFRFPNNEIRIHHFSAKSERCPPLSILQTIA
AFNVHCKLDSSVAAEQKELISIHASCFYEMKTAVVLVNDEEIHLVSMPSKRKKFPCFWCF
AVPVGLYDACLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRSWLSREIDPLRVQG
MSAELKRYLEDRLLLKQFAESDCVVDNGKVYKVQMEEVLPHSGSHEKLIRPVVRLQDRNI
VLTRINPEIRDTSVLVRLRPAWEDLRCYLTAKGRKRFEVYVCTMAERDYALEMWRLLDPE
AHLIGPKQILERVICVKSGSRKSLPNVFQDGMCHPKMAMVIDDRSKVWEDKDQPRVHVVP
AFTPYYSPQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFEDDIGILPHP
PDVSNYLMSEDVPNGNTNAPLSEGINGAEVERRLSQPGDKFPVDLVAQPMVNSVEFRHEP
SQPTAGIISGVTGPGSSRILIPPSLKPGLLGPPVKHEGSSVDRDYDMRKGVLGMRHGPDI
RGQISAEPPLISRPPNQASTSLTMQPFGGGLVEDDITSRTQTNNWSIASGKESNVIKSEK
HQAQLKPFSHSVVGSPPNVGHQQALQLKTEEATSVSDLQRQNAPSKPLLSEDGISQNHAS
SNCKDLQNEAGKLNLLPPLSIQVLQEIGRRCNSKVEFKSILSTSKDLQFSVEVLFTGEKI
GVGMGRTRKDAQQQAAENALRSLAEKYVAHVEPQCRVVDREFDKLSLGRDNGFLWDVVNP
ESNEPQTEDGMPRENASEASDAETRSSTPNAINQQMEKRISSPRMPHSVSNKRLKE
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttagggttcaaacatgaggtctacgatggcgacaagcacgtcggcgaactt
gacgtttttccgacgacgccgtttcacaacttccgcttccccaacaacgagattcgcatc
caccacttcagcgccaagagcgagcgctgccctccgctgtcgatccttcaaaccattgcc
gcattcaacgtccattgcaagctcgattcctcagtcgctgcagagcaaaaggagctaatc
tccatccacgccagttgcttctacgaaatgaagacggcggtagtgctggtgaacgacgag
gagattcaccttgtttcgatgccgagcaaaaggaagaagttcccctgcttctggtgcttc
gcggttcctgtaggactctacgacgcttgcttggggatgcttaacctgaggtgtctggcg
attgtgttcgatttggacgagacactcatcgttgcaaacacgatgaagtcgtttgaggat
agaattgaggccttgaggagttggctttcgcgcgagatcgacccgttgcgggtgcagggg
atgtccgcggaacttaagcgctacctggaagaccggttgctgctgaagcagtttgcggag
agcgattgtgtggtggataacgggaaggtgtataaggttcagatggaggaggtgttgccg
cattccggtagccacgagaaactgattcgtccggttgttaggctgcaagataggaatatt
gtactcacacgcatcaatcctgagattcgtgatactagtgtattagtgagattacgacca
gcatgggaggatctaagatgctatttaactgcgaaaggacgcaagcggtttgaagtatat
gtttgtactatggctgaaagggattatgctttggaaatgtggaggcttcttgatcctgag
gctcatcttataggtccaaagcaaatccttgaacgtgtcatttgtgtcaaatcaggctct
cggaaatctctgcctaatgtttttcaggatggcatgtgccatcccaaaatggcaatggta
attgatgaccggtcaaaggtttgggaagacaaggaccagcctagggttcatgttgttcct
gcctttactccttattactctcctcaagcagagacggccaatgctgttccggtcctttgt
gtagcgagaaatgttgcatgcaatgtcagaggttgttttttcaaagagtttgatgagagt
ttattacaaagaattgctgaaatcttctttgaagatgatattggaattttacctcatcct
ccagatgtgagcaactacttgatgtcagaggatgtgccaaatggtaatactaatgcccca
ctaagtgaaggaatcaatggtgcagaagttgaacggaggttaagccagcctggtgataaa
tttcctgttgacttagttgcccaacccatggtcaacagtgttgagtttagacatgaaccc
tctcagccaactgctggtattatttcaggtgtcactggccctggatcttcaagaatactg
attccgccttcattgaaacctggtttgcttggacctccggtcaagcatgaaggcagctct
gttgatcgtgattatgacatgcgaaaaggtgttctaggcatgagacatggtccagatata
agaggtcaaatttcagctgaacctcctctgatatcaaggccacccaatcaagcatcaaca
tctttaacaatgcagccatttggaggtgggttggtagaagatgatattaccagcagaact
cagacaaataattggtctatagcatctggtaaagaatctaatgtaataaagtccgaaaag
catcaggctcaactgaaaccattttctcatagtgtcgtaggttcacctcccaatgtcggg
catcaacaagcattgcaacttaagactgaagaggcaacttctgtttctgatttgcagagg
cagaatgctccatctaagcctctgctatcagaggatgggatatctcagaatcatgcatct
tctaattgtaaagatcttcaaaatgaagctggaaaattgaacttattaccacctctatcc
attcaagtgctgcaggaaattggaaggcggtgtaactcgaaggttgaatttaagtccatt
ctaagcaccagcaaggacttgcagttttccgttgaggtactatttaccggtgagaaaata
ggtgttggcatgggtaggacgaggaaggatgctcaacaacaagctgctgagaatgccctt
agaagcttagcagagaagtatgtggcgcatgtggagcctcagtgtagagtcgttgataga
gaatttgacaagctttctcttggacgtgacaatggtttcttgtgggatgtggtcaatcct
gaatccaatgagccacaaacagaagatggaatgcccagagaaaatgcttctgaggcttcg
gatgctgagactagatcaagtacacccaatgccattaatcaacaaatggaaaagcgtatc
agctccccgaggatgcctcattcagtttccaataaacgattgaaggaatga
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