Vigna angularis (adzuki bean): 108329346
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Entry
108329346 CDS
T04660
Name
(RefSeq) WD repeat-containing protein 82
KO
K14962
COMPASS component SWD2
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108329346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108329346
03036 Chromosome and associated proteins [BR:
var03036
]
108329346
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108329346
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
108329346
COMPASS/SET1 complex (yeast)
108329346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Methyltransf_13
Motif
Other DBs
NCBI-GeneID:
108329346
NCBI-ProteinID:
XP_017419005
UniProt:
A0A8T0KZB1
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All DBs
Position
3:complement(22714182..22732498)
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AA seq
341 aa
AA seq
DB search
MTSSLTELDDDLVRCMSIGAVFSEFGGKIHSIDFHRKDDLLVTASEDDSVRLYDIANAKL
LKTTSHKKHGTDRICFTHHPSSVICSSKYNLESTGESLRYLSMYDNRCIRYFKGHTQRVV
SLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILRLRGRPAVAYDQQGLVFAVAMEGGAI
KLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNNIYILDAYGGEKRCGF
SLEASPGTPIEATFTPDGKYMVAGSGGGTMHAWSIQTKNEVASWSSSIGVPSCLKWAPRR
AMFAAASSVLTFWIPNNDSKLKTDNGGNDAEGGSQPQTLLH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtcgcttacggagcttgacgatgatttggttcgctgcatgtccataggagcc
gtcttctccgaattcggtgggaagatacattccattgatttccatcgaaaggatgattta
cttgtcacggcaagtgaggatgactcagttcgactttatgacatcgctaatgccaagttg
ctgaagactacttctcataagaaacatggtacagataggatatgctttactcatcatcca
agctctgttatatgctcttcaaaatacaatttggagtctactggagaatcattgcgatac
ttatcaatgtatgataaccgatgcataagatacttcaaagggcacacacagagggttgtt
tctctttgcatgtctccaatcaatgatagcttcatgtctggttctctagaccacagtgtc
aggatatgggatcttcgagtaaatgcttgccagggcatcttacgtctacgtggtagacct
gctgtggcatatgaccaacaaggccttgtctttgctgtagcaatggaagggggggctatt
aaattattcgattctcgttcttatgacaagggtccatttgacacctttctagttggtggt
gacacagctgaagtttgtgatatcaaattcagtaatgatggcaaatcaatgcttttaact
actactaataacaatatttatattcttgatgcatatggaggagaaaagcgttgtgggttt
agtttggaagcatctcctggtactcctatagaggctacttttaccccagatgggaaatac
atggtggcaggctcaggaggtggaaccatgcatgcttggagtattcagacgaagaatgag
gtggcaagttggagcagctctattggcgtgccttcgtgcttgaagtgggcgcctcgcaga
gccatgttcgctgcagcttcaagtgttctcacgttttggatacctaataatgattcaaag
ttgaaaactgataatggtggtaatgacgctgaaggtggatctcaaccccaaacacttctc
cattga
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