Vigna angularis (adzuki bean): 108329487
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Entry
108329487 CDS
T04660
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108329487
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108329487
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
108329487
NCBI-ProteinID:
XP_017419200
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All DBs
Position
2:4147527..4153661
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AA seq
500 aa
AA seq
DB search
MSTSSQHQFRYTQTPSKVLHLRNLPWECSEEELKELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAISMVSYYASSSEPAMVRGKTVYIQYSNRHEIVNNKSPGDIPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKTAGFQALIQFTDAETASAARDALDGRSIPRYLL
PAHVGSCNLRISYSAHKDLNIKFQSNRSRDYTNPMLPVNYTAIEGTVQTAVGPDGKRKEP
ESNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGQTQALIQYPDVITAAAARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAFSDKSRDYTVPDPSLLPAQGPATAWQNPQAA
PMYPGSAPPYHTQVPGGQVPSWDPSLQAVRPSYISAPGTFPVQTGTVPPMPSYAPAAAMP
AASSPLAQSSPIGHNANPMGISQSGVPPNVNLQPSGAPHSVPGSSPIMQTSQAAQGLVQP
GAQPNARPDGASPPGQHYYA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacctcgagccagcaccagttccgatacactcagaccccctcgaaggtgctgcac
cttcgcaacctcccctgggaatgctccgaggaggagctcaaagagctctgcaagcccttt
ggtaagatcgtcaacaccaagtgcaatgtcggcgccaatcgcaaccaggcttttgttgaa
ttcgtagatctaaatcaagccatttcaatggtttcctattatgcttcatcttcagaacct
gctatggttcgtggcaaaactgtttacattcagtattctaatagacatgaaattgtcaac
aacaaaagtcctggagatattcctggaaatgtcttgctggtaactattgaaggtgtggaa
gctggggatgtaagcattgatgttatccatttggtgttttctgcatttggctttgttcac
aaaatcgcaacatttgaaaagactgcaggtttccaggctctgattcagttcactgatgct
gaaactgcttctgctgctagggatgcactggatggaagaagcataccaagatacctactt
ccagcccatgttggttcttgtaatttacgtatttcatactcagcacataaagatctgaat
atcaaattccaatcaaatcgcagcagggactacacaaatcctatgcttcccgttaactat
actgctattgaagggacggtacagacggctgtaggcccagatgggaagaggaaagaacct
gaaagcaatgtgcttttggcttccattgaaaatatgcagtatgctgttactgttgatgtc
ctccatactgtcttctctgcatttggaactgtccagaaaattgctatatttgaaaagaat
ggtcaaactcaggcactaattcagtaccctgatgtcataacggcagcagctgctagagaa
gctctagaggggcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggctttcagcgacaaaagtagagactatactgtgcca
gatcctagtctgctaccagcccaaggtcctgcaaccgcttggcaaaatccacaggctgca
cccatgtaccctggcagtgctcctccttatcacactcaagttcctggtggccaagtgcca
tcatgggatccatccctccaggcggttagacctagttacatatctgcacctggtactttt
cctgtacaaacaggtaccgttcctccaatgccatcttatgctccagcagcagccatgccc
gcagcttcctcacctcttgcacaaagcagccccattggtcataatgcaaatccaatggga
atctctcagtctggggttccacccaatgtaaatttacagcccagtggtgctccacattca
gttcctggttcctcacctatcatgcagaccagccaagcggctcaaggattagttcagcct
ggggctcagccaaatgcaagacctgatggtgcttcacctcctggtcaacattattatgct
tag
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