KEGG   Vigna angularis (adzuki bean): 108329674
Entry
108329674         CDS       T04660                                 
Name
(RefSeq) uncharacterized protein LOC108329674
  KO
K12857  Prp8 binding protein
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108329674
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:var03041]
    108329674
Spliceosome [BR:var03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    108329674
 Complex C
   U5 SnRNP specific factors
    108329674
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_SCAP ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD40_RFWD3 eIF2A Beta-prop_HPS5 Beta-prop_WDR75_2nd Beta-prop_RIG_1st Beta-prop_DCAF12 Beta-prop_Nup120_160 Beta-prop_NWD2_C PEP5_VPS11_N Nbas_N
Other DBs
NCBI-GeneID: 108329674
NCBI-ProteinID: XP_017419495
UniProt: A0A0L9U747
LinkDB
Position
2:34633640..34636884
AA seq 345 aa
MQVFPSEGESALSVVGPRPMEWSTVPYNAPQAPGPNGKQRTSSLESPIMLLSGHQSAIYT
MKFNPAGSVVASGSHDREIFLWNVHGDCKNFMVLKGHKNAVLDLHWTTDGTQIISASPDK
TVRAWDVETGKQIKKMVEHLSYVNACCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQTFP
DKYQITAVGFSDASDKIFTGGIDNDVKIWDLRKGEVTMTLQGHQDMITGMQLSPDGSYLL
TNGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYI
WDTTSRRILYKLPGHNGSVNECVFHPNERIIGSCGSDKQIYLGEI
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcaagtttttccaagtgaaggtgaaagcgctctgtcagttgtcggtccaaggccaatg
gaatggtctactgttccatataatgcccctcaagctcctgggccaaatggaaagcagcgg
acctcaagtttggaatcaccaatcatgttgctgtcaggtcaccagagtgctatatatacc
atgaagttcaatcctgcaggatcagttgttgcatctggatctcatgacagggaaattttc
ctctggaatgtgcatggggattgcaagaacttcatggttctgaaaggtcacaagaatgca
gttttggatcttcactggactactgatgggacacagataatttctgccagccctgataaa
acagtgagggcgtgggatgtggaaacaggaaaacaaataaaaaaaatggtagaacatcta
tcatacgttaatgcatgttgtccttctcgaaggggaccacctcttgttgttagtggctcc
gatgatggaactgctaaattatgggatatgcgtcaaaggggttccatccaaacattcccg
gataaataccagattactgctgttggcttctctgatgcatcagataagatcttcaccggt
ggtattgataatgatgtcaagatttgggatttgcgtaaaggtgaagttaccatgacattg
caaggtcatcaagatatgattactggtatgcagttgagtcctgatgggtcgtaccttctt
acaaatggcatggattgcaagctttgcatttgggacatgcgcccatatgctccacaaaat
cgctgtgtgaaggtgttggaagggcaccaacacaactttgagaagaacttgttgaagtgt
ggttggtctcctgatggaagcaaggtaacggctggtagttctgatcgaatggtttacatc
tgggataccacttctcgtcgcatcttgtataagcttcctggtcacaatgggtctgttaat
gagtgtgtttttcatcccaatgagcgtattattggatcttgcggcagtgacaagcagatt
tatctgggggagatatga

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