Vigna angularis (adzuki bean): 108329769
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Entry
108329769 CDS
T04660
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108329769
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LMBR1L-GP78-UBAC2 complex
108329769
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
Rhomboid
UBA_7
CUE
UBA_RAD5A
UBA_3
Motif
Other DBs
NCBI-GeneID:
108329769
NCBI-ProteinID:
XP_017419623
UniProt:
A0A0L9U7N1
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Position
2:complement(36925329..36934987)
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AA seq
294 aa
AA seq
DB search
MNGGPSGFTNAPVTRLFIVASAIFTIFFGIQGRFGTLGLSYQDIFGKIRLWKLIMSIFSF
SSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILTSLLLEVLAVALLKDPTANLVTP
GPYGLIFASFVPFFFDIPVSTRFRVFSFFFSDKSFIYLAGVQLLLSSWKRSILPGMCGIL
AGSLYRLNVFYIRKAKFPEFISSFFSRITLPSMGSPHATSSSSTRHSVGNLPSHPARQME
RNYPPMQSAVEPSEDSINTLVSMGFDRNNARQALVQARNDVNVATNILLEAQSH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaggcccgtctggtttcacaaatgctcctgtcacaaggcttttcatcgtggct
tcggctattttcacaatcttctttgggatccaaggccgtttcggcactctggggttgtct
tatcaggatatttttggaaaaattcgcctttggaagttgattatgtccatattttccttc
tcatcaacgccagagttgatgtttggactgtatctgctctattatttcagggtctttgaa
agacagataggctctaataaatactcagtctttatcgtgttctcaatattaacttcacta
ctgcttgaggtccttgctgtagcacttttaaaagatcctacagcaaacctagtcactcct
ggaccatatggccttatatttgcttcatttgtaccctttttctttgacattccggtttca
acacggtttcgtgtttttagcttcttcttctcagacaagtcattcatatatctagctggt
gttcagcttcttttgtcatcatggaaaaggtccatcttaccaggaatgtgtggcatcctt
gctggttccttgtaccgtttgaatgtcttttatatccgtaaagcaaagttcccagagttt
atctcgtcattcttctcacgaattacattgccatcgatgggaagtccacatgcaacatca
tcgtcatcaacaaggcatagtgttgggaatttaccttcccatccagctcggcaaatggag
agaaactaccctccaatgcaatctgcagtagaaccatcggaggactcgatcaatacactt
gtctcgatgggctttgacagaaataatgccaggcaagccctggtgcaggccagaaatgat
gtcaatgtggccaccaacattctattggaggcacagtctcactaa
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