Vigna angularis (adzuki bean): 108329869
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Entry
108329869 CDS
T04660
Name
(RefSeq) probable CCR4-associated factor 1 homolog 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108329869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108329869
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108329869
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108329869
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
108329869
NCBI-ProteinID:
XP_017419716
UniProt:
A0A0L9UHK5
LinkDB
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Position
4:complement(36930634..36932373)
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AA seq
273 aa
AA seq
DB search
MSIIPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDY
NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGSESPCIWQFNFREFNISEDIFASDSIEL
LRQCGIDFKKNSEKGIDVNRFGELLMSSGIVLNDAVHWVTFHSGYDFGYLLKLLTCRSLP
DTQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS
CTFRKLRDTFFSGSTEKYAGVLYGLGVENGQTN
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattataccgaaaggcgattcggttcaaatcagggaggtttggaacgataacctc
gaagaggagttcgcgttgatccgcgaaatcgtggacgagtataactacgtggcgatggat
accgagttccccggcgtggtactccgtccggtggggaatttcaagaacatcaacgactac
aactaccaaacgttgaaggacaacgtcgacatgttgaagctgatccaattaggtctcacc
ttctccgacgagaacgggaaccttcctacctgcggctccgagagtccctgcatctggcaa
ttcaactttcgcgagttcaacatcagcgaagacatcttcgctagcgattcgatcgagttg
ttgcgccagtgcgggatcgatttcaaaaagaacagcgagaagggaatcgacgtgaaccgg
ttcggggagcttctcatgtcctctggaatcgtgttgaacgacgccgttcattgggttacc
tttcacagcggctacgattttggctacctccttaagctgttgacatgccgaagcttgccg
gatacgcaggctgggttcttcgatttgatcaagatgtatttcccgatggtgtatgatatc
aagcatctgatgaagttctgcaacagcctccatggtgggttgaacaagctagcagagttg
ttggaggtggaaagggttggtgtgtgccatcaggctgggtctgatagtttactcacttct
tgtacatttagaaagttgagggatacattcttcagtggctcaacggagaaatatgctggt
gtcttgtatggtttaggtgttgagaatggacagactaattga
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