Vigna angularis (adzuki bean): 108330160
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Entry
108330160 CDS
T04660
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108330160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108330160
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108330160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Striatin
Motif
Other DBs
NCBI-GeneID:
108330160
NCBI-ProteinID:
XP_052727637
LinkDB
All DBs
Position
1:complement(821687..830972)
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AA seq
634 aa
AA seq
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MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKNMAENKAKCFDCGAIVTRLIREYS
VRATSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL
EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYERWMMKAANNGPAAFGERGRFDDKEIIVGGGGKSRKKTDEDDESHVSDKG
EEDEDEEVARRSRLGLNKKGGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDEAVG
NDPAEREDLAPEVPAPPEIKQNDEDEDEENEEGGGLSKSGKELKKLLRTSGLNESDAEDD
DYDDDVDDEAGVPPVIASKQKDAPKEEPTDNSPSKPVVTGTARGTLSTSKPSKGKRKFNE
ETKATTGAPPKKVKIENEPKSIVKDENGSASKNNTPAKGVPPAPSSKGGSSPMPSGPVSE
EEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKRAFADILKRISKIQKTNTSSYVILRDRE
SFMRTLDEQDNLITELKRRVVVLEAELAEEKARRTNKDNGGQSVPRAEPFMNNEFVSPGG
MSTNPPPMKTYVGSDHEGVTRVERLGLLEMDCLE
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgacctgctgttgaagccaacgtgtggcggatgtggttcaaccaccgatctt
tatggaagcaactgcaaacacatgactctgtgcttgacctgtggcaagaacatggcggag
aacaaggcaaaatgctttgattgtggcgccatcgttactcgcttgattcgagagtatagc
gttcgcgctacctctggtagtgacaaacattacttcattgggagatttgtatctggtttg
cctgacttttcgaagaagaaaagtgctgaaaacaagtggtccttgcagaaggagggatta
cagagccgccaagttaccgatgctttgcgggagaagtacaagaacaaaccatggctcttg
gaggacgaaactggtcagtctcaattccagggtcatctcgaaggtgcacaatcagctacg
tattacctgctcatgatggaaagaaaggaatttgttgccattcctgctggttcttggtac
aactttaacaaagttgcacaatataaacaattgacattggaggaagcagaagagaaaatg
aagaacagaaagaaaactgctgatggatatgaaagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacgtgggaggtttgatgacaaggagatcattgtgggcgga
ggagggaaaagccgtaagaaaactgacgaagatgatgaaagccatgtatcagataaagga
gaagaggatgaagatgaggaggtagcaaggaggagtagacttggactaaacaaaaaaggt
ggtgatgatgatgaagaaggtccgaggggaggagaccttgatctggatgatgatgatatc
gaaaagggtgatgattgggagcatgaagagattttcactgatgatgatgaagctgttgga
aacgatcctgcggaaagggaagatttggctcctgaagttcctgctcctccagaaatcaag
cagaacgacgaggatgaagatgaagaaaatgaagaagggggaggcctgagtaaatctggg
aaagagctgaagaagctgctacgtactagtggtcttaatgaatccgacgctgaagatgat
gattacgatgatgatgtggatgatgaggctggcgttcctcctgtgattgcttcaaagcag
aaggatgcacccaaggaagaacccactgacaatagcccttcaaaacctgtagtaacagga
actgctcggggaactttatccacttcaaagccttcaaaagggaagagaaaattcaatgag
gaaacaaaagccactactggtgcaccaccaaagaaggtcaaaatagaaaacgaaccaaaa
tcaattgtgaaagatgaaaacggttctgcatctaaaaataacacccctgcaaaaggtgta
ccaccagcaccatcatctaaaggtggttcttcccccatgccttctggacctgtgagtgag
gaagaaatcagggctgttttgatgcagaagactccattgaccacacaggaccttgttgct
aaattcagagcaaggctaagatgtccagaggataaaagggcttttgcggatatcctgaag
agaatctccaagatacagaaaacaaatacatccagttatgttatattgagagatagagaa
agttttatgcgtactttagacgagcaagacaatctaattacagaacttaaacggagggtt
gttgtcctagaggcagagttggctgaagagaaagctagaagaacaaataaagataatggt
ggacagagtgtgcctcgtgcagaacccttcatgaacaatgaatttgtttccccaggaggc
atgtccaccaatccacctcctatgaagacgtatgtagggtcggatcacgaaggcgttaca
agagtagagcgcttaggactcctggagatggattgtttagaataa
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