Vigna angularis (adzuki bean): 108330600
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Entry
108330600 CDS
T04660
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108330600
Transcription machinery [BR:
var03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108330600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
HTH_28
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
108330600
NCBI-ProteinID:
XP_017420582
UniProt:
A0A0L9UFA8
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Position
4:complement(28522149..28525426)
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AA seq
511 aa
AA seq
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MGVVTVSSSAARTPVGLNTNFSCNRLKRPLIIAFKGDKQNESALIATQEKIPVPIATTKT
QKKKIGKANKLPKRERVAFAEENSPSSLDVDYNEAAAMLENIYKLSPAFDADNAECIDGK
IKRVSRRRKKIADDCEEKDVNDDRVVRNQNKKAKRLNLDERISLKRNSDGDEVVPTRNKR
KNRMEKIEELIRDYSASTDFVGMDWRRMKIPPVLSSSEHAWLFKLMQPMKTILQVKEGLQ
KELEREPADSEVADATNMNIAHVKKALEVGQAARNKLIKHNLRLVLFVINKYFSDFASGS
RFQDLCQAGVKGLMTAIDRFEPNRRFRLSTYSLFWIRHAITRSMTLSSFTRVPFGLESVR
AEIQKAKTELTIELQRSPTEEEIIERAKISPERYHDVMKASKSILSLNSRHITTQEEFIN
GVVDNDGVNGDNSKQPALLRLALDDVLDSLKPKENLVIRQRFGLDGKGDRTLGEIARNLN
ISREMVRKHEMKALMKLKHSARLDYLRRYVV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagctgcgaggactccagtgggattgaatacaaac
ttttcctgtaatcgtctgaagagacctttaattatagcatttaaaggggataaacaaaat
gagtcagctttgattgcaactcaagagaaaatccctgtgcccattgcgaccaccaagacg
cagaagaaaaagatagggaaagctaacaaactacctaagagagaaagagttgcctttgcg
gaggaaaattctccttcttccttggatgtcgactataatgaagctgctgctatgcttgaa
aatatttacaaactcagccctgcttttgatgctgataatgcagaatgtatagatggtaaa
atcaaaagggtctcccggagaaggaagaagattgctgacgattgtgaagaaaaggatgta
aacgacgatagggtggtcagaaaccagaacaagaaagctaaacggttgaatcttgatgag
cggatttcattaaagaggaactcagacggggatgaagtcgttcccactcgaaataaaaga
aagaataggatggagaagattgaagaacttattcgggactattccgcatcaactgatttt
gtcggtatggactggagaagaatgaaaatacctcccgttctttcttcttcagagcatgct
tggcttttcaaattgatgcaacctatgaagacaatacttcaagtgaaagaaggtttacag
aaagagctagaaagagaacctgctgatagtgaagtagccgatgcaacgaacatgaacatt
gctcatgtaaagaaagcattggaggttggtcaagctgcaagaaacaaactcataaagcac
aatctccggcttgtcttgttcgttatcaacaaatatttttcagattttgcaagtggctct
aggtttcaagatctttgtcaggcaggagttaagggacttatgacagcaattgatcgcttt
gaaccgaacagaagatttcggctgtcaacatatagcttattttggattagacatgctatc
actcgttcaatgaccctctcaagcttcacacgcgttccgtttggacttgaatcggttcga
gcagaaatccaaaaagctaaaactgagttaacaattgagcttcagaggtcaccaacagag
gaagaaataatagaaagagctaaaatatctccggaaagataccatgacgtaatgaaggca
tcaaaatccattctttcgctgaactcgaggcatataactacacaagaggagttcattaac
ggggtcgttgataatgatggtgttaatggtgataatagtaagcaacctgctctactacgg
cttgctcttgatgatgtgcttgattccctgaagccgaaggagaacttagttatcagacag
agatttggacttgatgggaagggtgacagaacattgggagaaattgctaggaacttgaat
atatcaagggaaatggttagaaagcacgaaatgaaggctcttatgaagctcaagcattca
gctcgtttggattatcttcgtcgttatgttgtataa
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