Vigna angularis (adzuki bean): 108330841
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Entry
108330841 CDS
T04660
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108330841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108330841
03036 Chromosome and associated proteins [BR:
var03036
]
108330841
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108330841
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108330841
PBAF complex
108330841
GBAF(ncBAF) complex
108330841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
108330841
NCBI-ProteinID:
XP_017420905
UniProt:
A0A0L9UCC7
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Position
4:complement(14864039..14866805)
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AA seq
528 aa
AA seq
DB search
MNNQAKNVAASALFGHSGMGTQAHHPNPIQQWNHSISTPLHSQTQPQSQSRPQTQFPGLF
QFSEPQSHVLAQAQYAQTQMQSQIARAHPQPQTQPFAHLHSINTNAANGTSSPATGNAKR
PNPKPLLRSHNSSNMNQSMPSAQHQTKKSPGKGTMFLPESALYTQLLDFEAQVDTALARR
KFDIQEARLPPHVQKTLRVYVFNTFSNHAKIDSENNKANESSWSLRITGRILEDGMDLKS
GISQSSSPPYPKFSSFFKTITIHLDQSIYPDNHVIVWDSARSPAQQDGFEVKRKGNKEFT
ALIAIEMNYTPDKFMVSPQLSKLLGIEVETRPRIIASIFNYVKSRKLQIPNDPSSFICDP
SLQRVFGEERMDFTTVFQKLAQHLSQPQPIHLEHNIKLSGYAPAVTACYDIQVDVPFPLE
KGKSTFLSSLESQKEIEAYDEAIRVSLKKIQEHRRRRAFFLSFSQSPVEFIDTLITSQSK
DLKLVAGDARHNVEKELRSEFYNQPWVEDAAIRYLNRKTAGSDAVGRN
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcaagcaaagaatgtggctgcatcagctttgtttggtcattctggaatgggc
acacaagcacaccaccctaaccccattcagcaatggaaccattcaatttcaaccccttta
cactctcaaacacaaccacaatctcagtcacgtcctcagacacaattccctggtctcttt
cagttttcagaaccccaatctcatgtgcttgcacaagctcagtatgcacagacacaaatg
cagtctcagattgcacgtgctcatccacaacctcaaactcagccctttgcccacttgcat
agtataaatactaatgctgctaatgggacatcatccccggccaccggaaatgccaagcga
ccaaacccaaagcccctgttgaggtctcataattcatcgaatatgaaccaatccatgccg
agtgctcagcatcaaacgaagaaatcaccagggaaggggactatgtttttgcctgagtct
gctctgtatactcaattacttgattttgaggctcaggttgatactgctttggcaaggaga
aagtttgatatacaggaggctagactccctccccatgttcagaaaactcttcgtgtttat
gtgttcaataccttctcaaatcatgccaaaattgattctgagaataataaggccaatgaa
tcttcgtggtctctcaggataactggaaggatattggaagatggtatggatttgaaatct
ggcatttcacagagctcgagtcctccttacccaaagttctcttcatttttcaagacaatt
accatacatttggatcaaagcatttatcctgataatcatgtcattgtatgggatagtgca
cgttcacctgcccaacaggatggttttgaggtgaagaggaaaggaaacaaagaatttact
gcattgattgcaatagaaatgaattatacacctgacaagtttatggtttcaccacaactg
tctaaactcttaggtattgaggttgagactcgtccaagaataatagcttctatttttaac
tatgtgaagtccaggaagctacagatcccaaatgacccttcgtctttcatttgtgatcct
tctctacaaagggtgtttggggaagagaggatggatttcaccacggtttttcagaagtta
gcacagcatttgtcacagccacagccaatacatctggagcataacatcaagctttctgga
tatgcaccagctgtaactgcatgttatgatatacaggttgatgttccttttccactggaa
aaaggcaagtctacattcttgtcaagccttgagagccaaaaggagattgaagcttatgat
gaggccattcgtgtttccttaaagaagatccaagagcatcggagaagacgggcatttttt
cttagttttagtcagtctccagtggagtttattgatactttgattacatctcaaagcaag
gatttgaaacttgttgctggagatgccaggcataacgttgaaaaggaacttcgttctgaa
ttctacaatcaaccatgggtcgaggatgctgccattcgttacttgaaccgaaaaactgca
ggaagtgatgctgttggacgcaattaa
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