KEGG   Vigna angularis (adzuki bean): 108330850
Entry
108330850         CDS       T04660                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03030  DNA replication
var03410  Base excision repair
var03420  Nucleotide excision repair
var03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108330850
   03410 Base excision repair
    108330850
   03420 Nucleotide excision repair
    108330850
   03430 Mismatch repair
    108330850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:var03032]
    108330850
   03036 Chromosome and associated proteins [BR:var03036]
    108330850
   03400 DNA repair and recombination proteins [BR:var03400]
    108330850
DNA replication proteins [BR:var03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108330850
  DNA Replication Termination Factors
   ELG1-RFC complex
    108330850
Chromosome and associated proteins [BR:var03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108330850
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108330850
  Check point factors
   HRAD17(Rad24)-RFC complex
    108330850
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA_16 Rad17 RuvB_N Mg_chelatase AAA_24 ResIII AAA_11 DUF3802 AAA_5 AAA_14 DEAD SLFN-g3_helicase ADK AAA_assoc_2 AAA_2 nSTAND3 AAA_18 AAA_28 AAA_30 Effector_1 AAA_19 PhoH AAA_7 RNA_helicase TIP49 AAA_25 ATPase_2 NPHP3_N AAA_17 DUF3853 Gp44_lid Cdc6_lid NB-ARC IstB_IS21
Other DBs
NCBI-GeneID: 108330850
NCBI-ProteinID: XP_017420920
UniProt: A0A8T0KL59
LinkDB
Position
4:30184445..30191072
AA seq 338 aa
MQSSQQWVEKYRPRQVKDVAYQEEVVRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIAR
QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTVKRKNGYLCPPFKIIVLDEA
DSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEEIMSSRIL
YICKEEGLCLDAKALSTLSSISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKV
VEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLG
EADKCLVDGADEYLQLLDVVSNTMKAFSNMPEEFAYEC
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgcagagctctcagcaatgggtcgagaaataccgaccaaggcaagtgaaagatgttgcc
taccaagaggaagttgttcgagttctaacaaatacacttgaaactggaagttgcccccac
atgctcttctatggtcctcctggcactggaaaaacaactactgcccttgcaattgcccgt
cagcttttcgggcctgagctctataagtctagggtgctggagctgaatgcaagtgatgat
agagggattaatgttgttcgtacaaagataaaagattttgctgctgtggctgttggtact
gttaagcgtaagaatggttatctttgtccaccattcaagattattgttctagatgaggct
gattcaatgacagaagatgctcagaatgccctgaggcgtacaatggaaacgtactctaaa
gttacaaggttcttttttatatgcaactatgtgagcaggattatagaaccacttgcttca
cggtgtgcaaaattcaggttcaagccattgtcagaagaaatcatgagcagccggatattg
tacatatgcaaagaagagggcctctgtcttgatgctaaggctctttcaacccttagttct
atttctcatggagatcttcgccgggcaatcacatacttgcagtctgcagctcgcttattt
ggatcttcaatttcttcagagaatctgatttctgtgtctggggttgttccagaaaaagtt
gtggaggcagttcttcaagcttgcagaagtggtaattttgatttcgcaaacaaggaagtc
aacaatttcattgcggagggatatccagcttctcaaatgcttactcagttatttgaagcc
attgttgaagaaaatgatctgtcagatgaacagaaagcaagaatatccaagaagctgggt
gaagctgataagtgtctagttgatggtgctgatgaatacttgcaacttcttgatgtggtc
agcaatacaatgaaggcttttagcaacatgccagaagaatttgcttacgagtgttag

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