Vigna angularis (adzuki bean): 108331274
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Entry
108331274 CDS
T04660
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03030
DNA replication
var03410
Base excision repair
var03420
Nucleotide excision repair
var03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108331274
03410 Base excision repair
108331274
03420 Nucleotide excision repair
108331274
03430 Mismatch repair
108331274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
var03032
]
108331274
03036 Chromosome and associated proteins [BR:
var03036
]
108331274
03400 DNA repair and recombination proteins [BR:
var03400
]
108331274
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108331274
DNA Replication Termination Factors
ELG1-RFC complex
108331274
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108331274
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108331274
Check point factors
HRAD17(Rad24)-RFC complex
108331274
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_lid_RFC1
RuvB_N
Motif
Other DBs
NCBI-GeneID:
108331274
NCBI-ProteinID:
XP_017421413
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All DBs
Position
4:42459637..42464392
Genome browser
AA seq
682 aa
AA seq
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MVNGDHNLPNPTMKQSNVNVSDHQSMSKNHISPNRRRFRSRRRKTTAACPLSSLNLRAYD
IDGTNSPYYKGLTDQSLAIVNTIPSCAQPHPHAPSSYLLSSPYYKGLTDYSLVIRPWTPH
NHPLPFPHNSLSYTPSPYYAGLLTHYTLLFHARSLQPSFTTNLPNIKNPTLKDLMLDPHH
VGFVTQETAQVGNHALEELGEKTAAVVDQENDVDVEMVMTEEKALGESVFEQATHEVEGV
SEEAIFDTKLMSDDDVVEEKPLGEKSSEKSEMDLWKEEEVKEVLPLVSSEAVVVSSESDY
TWAAKYQPMALEEFICNKDIASQLKTMVEGGCGCSHFIFEGPPSVGKRSMIRAMLGEVFG
SDRVQVEEEYKNFILKGEMIDSVQVRVKKSLHHVEVNLSETNGYEKHVIVDLFKETYGQV
IDNSQPCYPENCKAIVLYEAEKLSIESLLYIKWLLEKYEGCNKVFFCCSDESKLQPVKPL
CITLRLSSPSTQELATILENIAIAEGIQLSRHLIDTIILRSNNNLRQAIRSLEATCRNRD
AVKENDVILTGWEQDILDIAKKIIQEQSPRQLYAIRRKLRSLMSHDVPPEFIYKSLVPEL
TTLVHHSLCPGIAKLDRDFMRPSEIKFETMKQHFCHVPKQSESDEKNTDSTKKNALTYLK
VEEFIAKVMSWYKNWSEKDSKL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatggcgatcacaacctgccaaatccaaccatgaagcaatccaacgttaacgtt
tccgatcatcagagcatgtccaagaaccacatctcacccaaccgtcgcaggtttcggtcc
agaaggaggaaaaccaccgctgcttgccccctctcatcgctcaacctccgcgcatacgac
atcgacggcaccaacagtccctattacaagggtctgactgaccagtcccttgcgattgtg
aacaccataccctcctgtgctcaacctcatcctcacgccccttcctcctacctcctttcc
agtccttattacaaaggccttacggactattcccttgttattcgtccctggactcctcac
aaccatcctcttccttttccccacaactccctctcctacacccctagtccttactatgca
ggtcttctcactcactacacccttctctttcatgcacgctcgcttcaaccttctttcact
acaaaccttccaaacatcaagaaccctactttgaaggacttgatgctcgatcctcatcac
gttggctttgttactcaagaaactgctcaagttggcaatcatgcattggaggaacttggg
gagaaaactgctgctgtggttgatcaagagaatgacgttgatgttgagatggtgatgact
gaagagaaggccttgggggagagtgtattcgagcaggctactcatgaggttgagggtgtg
tcagaagaagcaatctttgatacaaagttgatgagtgatgatgatgttgttgaagagaag
ccattgggggagaaatcatcggaaaagagcgagatggatttgtggaaggaagaggaagtg
aaagaagtgttgcctcttgtttcatcagaagcagttgttgtttcgtctgaatctgattat
acatgggcagccaaataccaacccatggccttggaagagttcatctgcaacaaagacata
gcaagtcaactcaaaacaatggtagaaggtggttgtgggtgcagccactttatatttgaa
ggaccaccaagtgtggggaagagatccatgataagggctatgcttggagaggtattcggc
tccgacagggtccaggtcgaagaagaatataaaaacttcattttgaagggagaaatgatt
gatagtgtgcaagtgcgcgtaaagaaatcactccatcatgtcgaggtgaatctgtcagag
acaaatggatacgaaaaacatgtaattgttgatttattcaaggaaacatatgggcaggtg
atagataactcgcaaccttgttatccagaaaactgcaaagcaatcgttttgtacgaggcg
gagaagctgtcgatagaatcgttgttgtatattaagtggctgctagagaagtacgaaggg
tgtaataaggttttcttctgttgctctgatgaatctaagcttcaacctgtgaagccactt
tgcatcactctccgcctttcatcgccatcaacccaagagctagctacgattttggaaaac
attgcaatagcagaaggaatacagttatcacgccacttgatcgataccataattttgagg
tccaacaacaacctacgccaggccattcgttcgttagaggccacttgccgaaatagggat
gctgtcaaagagaacgacgtgattctaactggttgggaacaagatattctggatattgcc
aaaaaaataatccaagaacaaagtccacgacagctgtacgccattcgtagaaagctacga
agtcttatgagccatgatgttcctcctgagtttatttacaagtctttggtaccagaatta
accactcttgttcatcactcgctatgcccagggattgccaaactcgacagggacttcatg
agacccagtgaaatcaaatttgaaaccatgaagcagcacttctgtcatgttccaaaacag
tccgaatctgatgagaagaacactgattcaacaaaaaagaatgccttaacttacttaaaa
gtagaagagtttatagcgaaagtgatgagctggtacaagaattggtctgaaaaagacagt
aagctgtag
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