Vigna angularis (adzuki bean): 108331406
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Entry
108331406 CDS
T04660
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108331406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108331406
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108331406
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108331406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
108331406
NCBI-ProteinID:
XP_017421545
LinkDB
All DBs
Position
4:34098399..34104347
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AA seq
728 aa
AA seq
DB search
MAVSDSPSGASTPPQQEQANKYGFTKPLSLAGPTDADLHRNNELERFLLDSGLYESNDES
AARKEVLHRLDQIVKSWVKQLTRQRGYTDQMVEDANAVIFTFGSYRLGVHGPGVDIDTLC
IGPSYVNREEDFFIILHNILAEMEEVSELQPVPDAHVPVMKFKFQGISIDLLYASISLLV
VPEDLDISHGSVLYDVDEPTVRSLNGCRVADQILKLVPNIEHFRTTLRCLKFWAKRRGVY
SNVTGFLGGVNWAILVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGF
PIWDPRRNPRDRFHTMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNKICDEIDLNKAQ
WSALFQPYIFFEAYKNYLQVDIVASDTDDLLAWKGWVESRLRLLTLKIERDTNGMLQCHP
YPHEYIDTSKPCAHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYIYWKPGMEI
FVSHVRRKQLPAFVFPDGYKRTRMPRHISHPTEKTGDDATKCYSGSGPSERCTKRKSYPE
MVEKKPDKPDKRASISPQRLESVSPESCTSKSGGTAQMSIDSMEGVWVAGSTTNYANSNC
EIKSSDVLPGSGLSSVVADMQISEPGFVDTTHDMLKPRCVEVPNENGVVDGDKAQDLALD
CLESEETESTNNFSNCKAGVVDMDQQLDKACNFITRDECSDYVPNASSQNLSCEPDFRLR
SVVKLKMG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttccgatagtccaagcggtgcctccacgccgcctcaacaggaacaagccaac
aagtacggtttcacgaagcctctatctctcgcgggtcccaccgacgctgatctccaccgt
aacaacgaattggagaggttcttgctcgattcggggctttacgagagcaatgatgagtcc
gccgcgaggaaggaggttcttcaccgcctcgatcagattgtgaagagctgggtgaagcag
ttgacgcgccaacgtggctacacagatcagatggttgaggatgcaaacgcagtcattttc
acttttggttcttaccgactaggggttcatggacctggagttgacattgacactttgtgc
attggtccttcttatgtgaaccgagaggaagatttcttcatcattttgcataacattctg
gctgaaatggaagaagtttctgaacttcaaccagttcctgatgcacatgttcctgtaatg
aaattcaaattccagggaatatctatagatttgctgtatgcaagtatatcacttttggtt
gtgccagaagacctggatatctctcatggttcagtgctgtatgatgttgatgaaccaact
gttcgaagtcttaatggctgccgtgtggcagatcaaattcttaaacttgttccaaatatt
gagcactttcgaactacactgagatgcttgaagttttgggctaaaagacgtggtgtttat
tcaaatgttactggattccttggtggtgtaaattgggctattttagttgctcgaatatgc
cagctttaccctaatgcaatccctagtatgttggtttcccggttcttcagggtctataca
cagtggcgatggccaaaccctgtaatgctatgctctattgaagagaatgaactgggattc
cctatatgggatcctcgtagaaatccccgagatagatttcacactatgccaataattact
cctgcatacccttgcatgaattcaagttacaatgtctcagcaagtactcttcgtgtcatg
atggaacagttccgctatggcaataagatttgtgatgaaattgacctcaataaagcccag
tggagcgcactttttcagccttatatcttttttgaggcatacaaaaactatttacaagtg
gacatagttgcatcggacactgatgatttactagcatggaagggctgggtagaatctcga
ttgaggctgcttacccttaagatagagcgagatacaaatggtatgctgcagtgccatcct
tatccacatgagtatatagacacatcgaagccatgtgctcattctgcatttttcatgggc
ttgcaaaggaaagagggagtaagaggtcaagaaggacagcaatttgatatacgtggaacg
gttgatgaatttagacaagaaataaatatgtatatctactggaagcctggaatggaaatt
tttgtttctcatgttcgtcgaaagcaacttcctgcatttgtttttcctgatggttacaaa
cgcactagaatgccaagacacataagccatccgaccgaaaaaacaggtgatgatgccacg
aagtgctactctggatctgggccatctgaaagatgcaccaagaggaaaagttaccctgaa
atggtggaaaagaagccagacaaaccagataaacgggcatctattagcccacagaggtta
gaaagtgtttctcctgaaagttgtactagtaaatcaggtggtacagctcaaatgagtatt
gatagtatggaaggggtttgggtagctggttcaacaaccaattatgctaacagcaattgt
gaaattaagtcatctgatgtgctcccaggaagtggactaagctctgtcgtagctgacatg
cagataagtgaaccgggctttgttgacaccacacatgatatgttgaaaccgaggtgtgta
gaagttcctaatgagaatggagttgtcgatggggacaaagctcaggatctggctttagat
tgcttggaaagtgaagaaaccgaatctactaacaatttttcgaactgtaaagcgggtgtc
gtcgatatggatcagcaactagacaaagcatgtaatttcatcacaagggatgaatgctca
gattatgtaccaaatgccagctcccagaacctcagttgcgagccagatttcagactcaga
agtgttgtaaaattgaagatgggctag
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