Vigna angularis (adzuki bean): 108331439
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Entry
108331439 CDS
T04660
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108331439
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108331439
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
108331439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
108331439
NCBI-ProteinID:
XP_017421603
LinkDB
All DBs
Position
4:complement(8683831..8734839)
Genome browser
AA seq
2084 aa
AA seq
DB search
MLIQIPRLTNSLRDPFDVDQYYLHRKTILHNQKPRNSASSLDESELARKIVQGWEEAPSE
VRQAYKQFIGAVVDMVDGEMRSEEFHEVALAVYRLFGTPMEEGYIDKIISDKKFELQKLI
GHTLVDAKLRQVASLAQRLLNLQPLNKMSAISIERNLDADDDLEFGADLFFQAPARFLVD
VSLDDGDMMDFESIVPLEFHNEQYGHTSPADHSIVDGEKFNLSWIRDACDKIVRNCDSQL
SQDELAMAICRVLNSEKPGEEIAGDLLDLVGDSAFETVQIFLLHRKEIVESIHHGLLVLK
SDKNASNAQSRMPSYGTQVTVQTESGKQIDKLRRKEEKRNRRGIEHAGDGDLSVLDFSSL
LQASERIKLFDEMIGSGDRSESIAVTALPEGTVRKHFKGYEEVIIPPKPTAPLKPGEKLI
EIRELDDFAQAAFRGYKSLNRIQSRIFSTVYGTNENILVCAPTGAGKTNIAMISILHEIG
QHFRDGYLHKEEFKIVYVAPMKALAAEVTSTFSQRLSPLNMIVRELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
TMIRIVGLSATLPNYLEVAQFLRVNPDTGLFFFDSSYRPVPLAQQYIGISEPNFAARNEL
LNDICYRKVADSLRQGHQAMVFVHSRKDTAKTANKLVELARRNEDLELFSNNTHPQYTFM
KKEVIKSRNKDLVELFEYGVGVHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNLP
AHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAYYLRL
LTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIGWDE
VMADPALSSKQRSLVIDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYN
EMLRRHMNDSEVINMIAHSSEFENIAVREEEQNELETLARTSCPLEIKGGPSNKHGKISI
LIQLYISRGSMDSFSLVSDAAYISASLARITRALFEICLRRGWCEMTLFMLEYSKAVDRQ
VWPHQHPLRQFDKDLSAEILRKLEERGADLDRLFEMEEKDIGALIRYAPGGRLVKQNLGY
FPSLQLSATVSPITRTVLKVDLVITPVFTWKDRFHGSAQRWWILVEDSENDHIYHSELFT
LTKRMARAEPYKLSFTVPIFEPHPPQYYIHAVSDSWLHAEAFYTITFHNLPLPEARTSHT
ELLDLKPLPVSSLGNNAYEGLYKFSHFNPIQTQSFHTLYHTDNNVLLGAPTGSGKTISAE
LAMLRLFNTQPDMKVIYIAPLKAIVRERMSDWQKRLVSQLRKKMVEMTGDYTPDLMALLS
ADIIISTPEKWDGISRNWHTRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQT
ERPVRFIGLSTALANAGDLADWLGVEEIGLFNFKPSVRPVPLEVHIQGYPGKYYCPRMNS
MNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQFAASDEQSRQFLNLPEETLQMVL
SQVSDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFGNNKIQILVCTSTLAWGVNLPAHLV
IIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEP
FPVESSLREHLHNHINAEIISGTICHKQDAVHYLTWTYLFRRLMVNPAYYGLENPDSEFL
NSYLSSLVQDTFEDLEDSGCIKMDEEKVEPMMLGSIASQYYLSYMTVSMFGSNIGPDTSL
EVFLHILSAASEFDELPVRHNEENYNEALSEKVKYPVDKNRLDDPHIKANLLFQAHFSQL
ELPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMIMQGLWFGKDSSL
WMLPCMNTDLISSLSQRGISSVQELLDIPKTALQTVTANFPASRLHQDLQHFPHIKVKLK
VQRRDTDGERSDILNIRLEKINSRRHSSRAFVPRFPKIKEEQWWLVLANTSTSELYALKR
VSFSDHLNTSMKLPLTPANLQGVKLILVSDCYIGFEQEHSIEKA
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgttgattcagattcctcgcctcaccaactctctcagagaccccttcgatgtcgaccag
tactatcttcatcgcaaaaccattctccataatcaaaaaccccgcaattctgcaagttct
cttgatgaatcggaactggcgcggaagattgttcaagggtgggaagaagctccttcggaa
gtgcgacaagcctacaagcagtttataggagcagtggtggacatggttgacggggaaatg
cgctccgaggagttccatgaggtggcactggctgtgtaccggctgtttggtactccaatg
gaggagggttacattgataaaattatttcagacaaaaagtttgaattacaaaagcttatt
ggacacacacttgttgatgccaagttgaggcaagttgcatcactagcacaaaggctttta
aatttgcagccgctcaataaaatgtctgccatttctattgaaagaaacttagatgctgat
gacgatttagaatttggagctgatttgttttttcaagcacctgctcgtttcttggttgat
gtatccttagatgacggagatatgatggattttgaaagcattgttccattagaatttcac
aatgaacagtatggtcataccagcccagcagatcattctattgtcgatggggaaaagttc
aacttgtcttggataagagatgcatgtgataaaattgttaggaattgtgattcacagcta
tcccaagatgaattggcaatggccatttgccgggttcttaattcagaaaagcctggtgaa
gagatagctggagatctgttggatcttgttggtgatagtgcatttgaaactgtgcaaatc
tttttattgcatcgaaaggagattgttgaatctattcatcatggcttattggtattgaag
tctgataaaaatgcttcaaatgctcagtctcgcatgcctagttatggaacacaggtcact
gttcaaacagagtcaggaaagcaaattgacaagcttcgacgcaaggaggaaaaacgaaat
agacggggaatagaacatgctggtgatggtgacttgtctgtgctggatttctcatcttta
cttcaagcaagtgagaggataaaattgtttgatgagatgattgggtctggagataggtcc
gagtcaatagctgttactgctcttcctgaaggaactgtaaggaagcattttaaggggtac
gaagaggttattattcccccaaaaccaactgcaccgttgaaacctggagaaaagctgatt
gagatccgggagttagatgactttgcacaagctgcattccgtgggtacaaatcactaaac
cgaatccagagcaggatattttcaactgtttatggaactaatgagaatattctagtgtgt
gctcccactggagctggcaaaactaatatagctatgatttcaattttacatgagattgga
cagcacttcagggatgggtacttgcataaagaagaatttaagatagtttatgttgcacca
atgaaggctttggctgctgaagtcacctcaacattcagccaacgtttatctcctttgaat
atgattgttagagagcttacaggagatatgcagctctctaaaaacgagcttgaagaaact
cagatgatagtgacaacacctgagaaatgggatgtcattacacgcaaaagcagtgacatg
tcactgtcaatgctggtaaagctgttaattattgatgaagtccatctactcaatgatgat
cgaggtcctgtgatagaggctctggttgctaggacgctccggcaggtggaatctacacag
acaatgatacgcattgtgggcctttctgccactcttcccaattacctagaggttgcacaa
tttctcagggtaaatcctgacacaggccttttcttctttgattctagttaccgtccagtg
cctcttgcacaacaatatattggaattagtgagccaaactttgcagctcgtaacgaattg
ttgaatgatatatgctatagaaaggttgctgattctctaaggcaaggccaccaggcaatg
gtatttgtccactcccgaaaggacactgccaagacagctaataaactggttgaactagca
cggaggaatgaggatttggaactttttagtaataatacacatccacaatacacctttatg
aagaaagaagtcattaaatccagaaacaaagatcttgttgaactttttgaatatggtgtg
ggtgtgcatcatgctgggatgctacgtgcagatagaggacttactgagcgacttttctct
gatggacttctgaaggttcttgtctgtacagcaactttggcatggggtgtcaatctacct
gcacacacagtggtcattaagggtacccaactatatgatccaaaagctgggggttggcga
gaccttggtatgcttgatgttatgcagatatttgggcgagctgggagacctcagtttgac
aaaagtggtgaaggtattataattacgtcacatgacaaactagcttattatctgcgactg
ttgacaagccaactcccgattgaaagccagttcattagctccttgaaagataatttaaat
gcagaggtggcattgggtactgtaactaatgttaaggaagcctgtgcttggctgggctat
acttatctttttataaggatgaagatgaatcctttagcctatggtattgggtgggacgag
gtgatggcggatcctgctcttagttctaagcagaggtctcttgtaattgatgctgcacgt
gcccttgataaagcaaaaatgatgcgttttgatgagaaaagtggcaatttttattgtact
gagcttggtcgcattgcaagccatttttacattcaatattccagtgtagaaacatacaat
gaaatgctgagacggcacatgaatgacagtgaggtgattaacatgattgcacattcttct
gaatttgaaaatattgctgttcgagaagaagaacaaaatgagctagagacgttggcgcgc
acatcatgtccattggaaatcaagggtggtccttccaataaacatggaaaaatttccatt
ttgattcagttgtacatatctcgaggttctatggattctttttctttggtatctgatgct
gcatatattagtgcaagcttggctcgaataacacgggcgttatttgagatttgtttacga
agaggctggtgtgagatgactctgttcatgttggaatatagcaaagctgtggatcgtcaa
gtttggccacatcaacatcctcttagacaatttgacaaggacctttctgcagaaatattg
agaaagcttgaagagcgtggggctgacctagatcgcctgtttgagatggaggaaaaagac
attggggcattaattcggtatgcaccaggaggaaggttggtcaagcaaaacctagggtat
tttccatcacttcaattatcagcaactgtgagtccaattacaagaactgtgctgaaggtt
gatttggtcattacgcctgttttcacttggaaagatcgttttcatggtagtgctcaacgt
tggtggattttggttgaggattctgagaatgatcacatctaccactcggaactctttacg
ctgacaaaacggatggctagagccgaaccttataagctttccttcactgtacctatattt
gaaccacatccaccgcaatattatatccatgctgtttctgattcatggcttcatgctgag
gcattctacactattacttttcacaatttaccattgccagaggctcgtacatctcataca
gaactccttgatttaaaacctctccctgtgtcttctctcggcaacaatgcttatgaagga
ttgtataaattttcacattttaatccgatacaaacacagagttttcataccttgtatcac
acggacaataatgttctgttaggagctccaactggtagtggaaaaactatatctgctgag
cttgctatgcttcgtcttttcaatactcagcctgatatgaaggttatttatatagctcct
ttgaaagcaatagtcagggaaagaatgagtgattggcaaaagcgtcttgtctctcaacta
aggaaaaaaatggttgaaatgactggagactatactcctgatttgatggctcttttgtca
gctgatatcatcatatctactcctgaaaagtgggatggaattagtcgtaattggcatacc
cgtagttatgtcacgaaggttggacttatgattttggatgagattcacttattgggagca
gatcgtgggccaatccttgaggttattgtatctaggatgaggtatatatcatcccaaaca
gagcgaccagtaagatttattggcctttctacagcactggctaatgctggtgatctagct
gactggttaggcgttgaggaaatcggactcttcaatttcaagccaagtgtgaggcctgta
cctctggaagttcatattcagggttatcctggaaagtattattgcccaaggatgaacagc
atgaataaaccagcatatgctgcaatatgcacacattcacctgcaaaaccagttcttata
tttgtctcatcccgacgtcagacgagacttactgcacttgacctaattcagtttgctgcc
tcggatgaacaatcaagacagtttcttaatttgcctgaggaaaccctgcagatggttctg
tctcaagtctctgaccaaaaccttaggcatactttgcaatttggcattggattacatcat
gctggtctgaatgacaaagacagatcactggttgaggaactctttggaaacaacaaaatt
cagatattagtttgtaccagcacattggcttggggtgtgaatcttccagctcatcttgtg
attatcaagggaactgagtactatgacggaaaagcaaagaggtatgttgattttccaatc
actgatattttgcaaatgatgggtcgtgctggacgccctcagtttgatcaacatgggaaa
gctgtgattcttgttcatgaacccaaaaagagcttctataaaaagtttttgtatgaaccc
tttcctgttgagagtagtttgagggagcatttgcacaatcacattaacgctgaaattatt
tctggaaccatttgtcataaacaagatgcagtgcattatcttacgtggacttatttattt
cgtagactgatggtaaatccggcatactatggactggagaaccctgactccgagtttctg
aattcatatttgtctagcttagtgcaggacacatttgaggatttggaagacagcggatgc
ataaaaatggatgaagagaaggtggagcccatgatgttgggttcaattgcatctcagtat
tacctcagctacatgactgtatctatgtttggttctaacataggtccagatacatcactt
gaagtctttctgcatatcttatctgctgcttctgaatttgatgaattacctgtgcgtcat
aatgaggaaaattacaatgaagctctgtctgagaaagttaaatatccggtggataagaac
cgtctagacgaccctcacatcaaagcaaatcttctgtttcaggctcatttttctcaattg
gagttaccaattagtgactatgtcacagacttgaaatccgtattagatcagagtatacgc
ataattcaggcaatgattgatatatgtgcaaacagtgggtggctttctagctcaattact
tgcatgcgcctcctgcaaatgatcatgcagggcttgtggtttggcaaggactcttcctta
tggatgcttccttgcatgaatacagatctgataagttctcttagccaaagaggaatttct
agtgtacaggaattactagacattcccaaaacagcattgcaaactgtaactgcaaatttc
ccagcttcaagattgcaccaggatctacaacatttccctcatattaaagtgaaattaaag
gttcagaggagggacactgatggtgagaggtctgacatattaaatatcagattagagaag
atcaattcaagacgacactcctctagagcatttgttcctcgttttccaaagataaaagaa
gaacagtggtggttggttcttgctaatacctctacatctgagctatatgctttgaaaaga
gtctctttttcagatcacttaaatacctcaatgaagttgcctctgactccagctaacctt
cagggtgtaaaactgattttagtctccgattgttacattggatttgaacaagaacactcc
attgaaaaagcttga
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integrated database retrieval system
