Vigna angularis (adzuki bean): 108331574
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Entry
108331574 CDS
T04660
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03440
Homologous recombination
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
108331574
03460 Fanconi anemia pathway
108331574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
var03032
]
108331574
03400 DNA repair and recombination proteins [BR:
var03400
]
108331574
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108331574
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Topoisomerases
108331574
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
108331574
FA (Fanconi anemia) pathway
108331574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
108331574
NCBI-ProteinID:
XP_017421836
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All DBs
Position
4:18735395..18779993
Genome browser
AA seq
907 aa
AA seq
DB search
MNVLNVAEKPSVAKSVSTILSRNQGMRMREGRSRYNKIFEFNYTIRGQPCHMLFTSVTGH
LMELEFDERYRKWHACNPADLFRAPVHKSVPEDKKDIKRTLEEEARRCQWLVLWLDCDRE
GENIAFEVIDVCTAVNPHLTIKRARFSALIEREIHHSVQNLEEPKKSLADAVDARQEIDL
RIGASFTRFQTMLMKDAFAIDTATDGRNLVLSYGPCQFPTLGFVVERYWEIQAHEPEEFW
SINCAHDSDGRIAKFSWMRGHLFDYTCAVIIYEMCVEELTATVTNVRLQEKLKYPPHPLN
TIELEKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDSFSSRTDLHTIVQEQQGHPE
WGVYAQRLLDPGTGLWRNPRGGGHDDKAHPPIHPTKFSTGESGWSQDHRKLYELVVRHFL
ACVSKPAVGAETTVEIGIAGELFSACGRVILEKNYLDVYHYESWGGSLIPTYTIGQQFIP
STFILDSGITRPPPLLSEADLLSCMDKEGIGTDATMHDHIKKLLDRFYATKDANTRFTPT
NLGEALVMGYDDMGYKLWKPYLRAVMERDMKFVSEGNKSKADVLATSLQLMEACFLDARL
NKGKLLEAMAIFFERSSRSANDELHAMGVVRRCGLCQESDMVLRKNRDGNFMVGCLGYPQ
CRNAVWLPGSLSEAVVTTNTCNICTPGPVYLIQFKFRQLEIPPNYSVNHLGCIGGCDEIL
SQVTEICGRGSRMPARPRGPTAPPSNAHHTNPRQRPCMNCQETGHSSNDCPLRSRNVGHR
GRSEHNGEASVSCSSCRTPCILRTANTANNRGRKFYACQSQECNFFVWEDSLNDGTGARS
ATRSNSIPSSNPGRTGGRGSRGRGGQTGAHTAATTFVSATGDPISGRRCFRCGDPSHFAN
LCPNRGV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttctgaacgtggcggagaagccctctgtggcgaagtccgtctccaccatcctc
tcccggaaccagggcatgagaatgcgggaggggcgttcccgctacaataagatctttgag
ttcaactacaccattcgaggccaaccctgccacatgctcttcacctccgtcaccggccat
ctcatggagctcgagttcgacgagcgttaccgcaagtggcacgcgtgtaatcccgccgac
ctcttccgcgcccctgtccataaatccgtcccggaggacaaaaaggatatcaagaggacg
ctggaggaggaagcgaggaggtgccagtggcttgttttgtggctcgattgcgatagagag
ggtgagaacattgcgtttgaagtgattgacgtctgtactgcggtgaatcctcatcttact
ataaaacgggctcggttttctgcattgattgagagagagatccatcattctgttcagaat
cttgaggagcccaagaaaagtcttgctgatgccgtcgatgctaggcaggaaatagatctc
cgtataggcgcttctttcacgaggttccagaccatgttgatgaaagatgcttttgccatt
gacactgctacagatggcagaaatcttgtcctaagttacggcccttgccagtttcctaca
cttggatttgtcgtggaaagatattgggagatacaagcacatgagccagaagagttttgg
tctatcaactgcgctcatgattcggatggacgcattgctaagttcagctggatgcggggg
cacttgtttgattatacatgtgcagttataatatatgagatgtgtgttgaggaactgaca
gcaacagtgacaaacgttagactacaggaaaaactgaaatatcctccacatcctttgaat
accattgagcttgaaaaacgtgcttcaagatacttcaggatgagttctgagcacacaatg
aaggtggcggaagaactttaccaagctggtttcatcagttatccccgtacagagactgat
agcttttcttcaaggactgacttgcatacaattgtgcaagaacaacaagggcatccagag
tggggagtatatgcacaacggttgttggaccctgggacagggctttggagaaaccctaga
ggtggtggacatgatgacaaggctcatccacccattcacccaacaaaattttctactgga
gaatctggatggagccaagaccaccgtaaactgtatgagctggttgttcgccactttttg
gcgtgtgtctcaaagcctgctgtaggagctgaaaccaccgttgaaattggtattgctggt
gaactattttctgcatgtgggagggtgattctagagaaaaactacttggatgtttatcac
tacgaatcatggggtggatcactgattccaacatatactattggtcaacagttcattcca
tcaacatttatccttgattcaggaataacccgcccaccaccacttttaagtgaagctgat
ttgctgagttgtatggacaaggagggtattggtacagatgctacaatgcatgatcacatc
aagaagctacttgatcgattttatgcaactaaggatgctaacactcgtttcacaccaact
aatcttggtgaggcacttgtcatgggctatgatgacatggggtacaaactatggaaacct
tatcttagagcagttatggaacgtgacatgaaatttgttagtgaaggaaataaaagcaaa
gctgacgttttggcaactagcttgcagctgatggaggcttgtttcctagatgcaagattg
aataaaggaaaacttttagaagccatggcaatattttttgaaagatctagtagatctgcc
aatgatgagctacatgcaatgggggttgttcgacgatgcggactttgtcaagaatcagac
atggtgctaaggaaaaatcgagatggcaattttatggttggatgcttgggttaccctcag
tgtaggaatgctgtctggctccctggatcactgtcagaagcggttgtgaccaccaatacg
tgcaatatttgtactcctggtcctgtttacttaattcagttcaagtttaggcagctggaa
attccaccaaactacagtgtcaaccatttgggatgcattggtggctgtgacgagattctt
tcacaggtgacagaaatatgtggcaggggatctcgcatgccagcaagacctcgaggacca
actgcaccacctagcaatgcccatcatactaacccacgacaaagaccttgtatgaactgt
caagaaacaggacattcttctaatgattgtcctttacgctctcggaatgtcggacatcgt
ggaagaagtgaacataacggggaagcttctgtttcatgcagttcgtgtaggacaccatgt
atcttgagaactgcaaatacagcaaataacaggggaaggaagttctacgcatgtcaatcg
caggaatgcaacttctttgtatgggaggatagcctcaatgacggaactggagccagaagt
gccacacgttcaaatagtattccatcctccaatccggggcgaactggtggacgtggatct
cgtggtagaggtggccagactggagctcatactgctgccacaacatttgtttcagccacc
ggagatcctatttctggtagaaggtgctttaggtgtggtgatccatctcactttgcaaat
ctctgccccaatcgtggtgtctga
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