Vigna angularis (adzuki bean): 108331737
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Entry
108331737 CDS
T04660
Name
(RefSeq) SWI/SNF complex subunit SWI3C isoform X2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108331737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108331737
03036 Chromosome and associated proteins [BR:
var03036
]
108331737
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108331737
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108331737
PBAF complex
108331737
GBAF(ncBAF) complex
108331737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
PTPRCAP
DUF3306
Pox_Ag35
Motif
Other DBs
NCBI-GeneID:
108331737
NCBI-ProteinID:
XP_017422126
UniProt:
A0A0L9UF86
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Position
4:complement(30234909..30241828)
Genome browser
AA seq
788 aa
AA seq
DB search
MPASPSENRTRWRKRKRDSQVSRRHPKHEEEEEDDEENPNAEDDHAEREYDSEEQTHQHQ
NHPNSQPHVETEVLSDHGVTISQFPVVIKRSVNRPHSSVTAIVALERALESGDSKAQSSL
APLVIENVSHGQLQALSAVPSDNLAFEGDSSFVISPPAILEGRGVVKRFGTKVLVVPMHS
DWFSPATVHRLERQAVPHFFSGKTPDHTPQKYMECRNCIVAMHLEEPGKRITVSDCQGLL
TGLDFEDLTRIVRFLDHWGIINYCVQTSRLESPNVMSCLREEPSGEVRVPAEALKSIDSL
IKFDNPSCKLKAEEIYPSLTARNMDVFDLEDRIREHLSENHCNYCSRPLPVVYYQSQKEV
DILLCTDCFHDGRFIIGHSSLDFLRVDLTRDYGELDGENWTDQETLLLLEAMEIYNENWN
EIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSTHLSSNAMDRDGSGRLHCYSNGDTA
GPVHQVRDSDSRLPFANSGNPVMALVAFLASAVGPRVAASCAHAALAVLSVDNSGSTSQV
EAPGHDNRTNSESIRCRDGGSHGETAVSNNNNNEDKAKVHGSWGLNDGRTTPLSAEKVKD
AAKAGLSAAAMKAKLFADHEEREIQRLCANIVNHQLKRLELKLKQFAEIETLLMKECEQL
ERTKQRFAAERSRVISARLGTAGATPTMAVSGVGPSMASNGNNRQQMISASPSQPSISGY
GSNQSLHPHMSFAPRPSMFGLGQRLPLSMIQQSQSPSSTAMFNAPSNVQPTSNHPLLRPV
SGTNSGLG
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctccttcagaaaaccgaaccagatggaggaagcgcaagagagattctcaa
gtctctcggcgccaccccaagcacgaagaggaggaggaagacgacgaagaaaaccccaat
gcggaggatgaccatgcagaacgcgagtacgattccgaagaacaaacgcatcaacaccaa
aaccaccctaattcgcaaccacatgtggagacggaggttctctcagatcatggcgttacc
atttctcagtttccggtggtgataaagcgctccgtgaaccgccctcactcctccgtcact
gcaatcgtggctctggagcgagcccttgagtctggagacagcaaggctcagagttctctt
gctcctcttgttattgaaaacgtgtctcacggtcagcttcaagccctgtcggctgtgcca
tctgataacttggcttttgagggtgattcctcttttgtcataagtccccctgccatattg
gaaggtcgtggggttgttaagcgctttggaactaaggttctagtagttcctatgcattca
gattggttttcgcctgccacggtgcataggttagagaggcaagcagtgccacatttcttt
tcagggaagacacctgatcatactccccagaagtacatggagtgtaggaactgtattgtt
gctatgcatttggaggagcctgggaagaggatcacggtttctgattgccagggtttgttg
acaggacttgattttgaagatttgactcggattgtgaggttccttgatcattggggaatt
attaattactgtgttcagacatcgagactcgagtctcccaatgttatgtcttgcctgagg
gaggagcctagtggagaggtccgtgtgccggctgaggctttgaaatctattgatagtttg
atcaaatttgacaatccgagttgtaagctgaaagctgaagaaatttatccgtcattgact
gcacgtaatatggatgtctttgatctggaggacagaataagagaacatctttcggagaat
cattgcaattattgttctcgtcctcttcctgttgtatactaccagtctcagaaagaggtt
gatatattactttgcactgattgctttcatgatgggagatttatcattggtcattcaagt
ctagattttctaagggtggatttgacaagggattatggtgaactagacggggaaaattgg
actgatcaagaaactttactgcttcttgaagcaatggagatttacaatgagaattggaac
gaaattgctgagcatgttggtaccaaatcaaaagcacaatgcattcttcattttctccgt
ctacccatggaagatggaaaattggaaaatattaatgttccgagcacgcatttgtcatcc
aatgcaatggatagagatggtagtggaagactgcattgttactcaaacggagatactgca
ggacctgtccatcaagtgagagattctgacagccggcttccttttgcaaattctggaaat
cctgttatggctttggttgcctttttagcctctgcagttggaccaagagtagctgcttct
tgtgctcatgcagcattagcagtattgtcagtggataattctggcagcacttcacaggtg
gaagcacctgggcatgataataggacaaattccgaaagcatacgatgtcgagatggtggg
tctcacggagaaacagcggtatcaaataataataataatgaggataaggctaaggtacat
ggttcatggggactaaatgatggtaggacaaccccactatctgctgagaaagttaaagat
gctgctaaagcaggcctctctgcggcagcaatgaaagcaaaattatttgccgatcatgaa
gagcgagaaattcagaggttgtgtgctaatatagttaatcatcagctgaaaagattagag
ttgaagctgaaacagtttgcggaaatcgaaacattgttaatgaaagaatgcgaacaactg
gagagaacaaagcaaaggtttgctgctgaacggtctcgtgtaatatcagcacgtcttgga
actgcaggagccacaccaacaatggctgtatcgggtgttggtccttcaatggctagcaat
ggcaacaacaggcaacaaatgatctctgcttctccctcacagcccagcatctcagggtat
ggcagcaaccaatcacttcatccacatatgtcctttgccccacgaccttcgatgtttggg
ttggggcaaagattaccgctatctatgatacaacaatcacaatcaccttcttcaactgcc
atgttcaatgcccctagtaatgtgcagcccacgtccaatcatccattgttgaggcctgta
tcaggaacaaactctggtttaggttaa
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