Vigna angularis (adzuki bean): 108331783
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Entry
108331783 CDS
T04660
Name
(RefSeq) protein ALTERED SEED GERMINATION 2 isoform X7
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108331783
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
108331783
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
NBCH_WD40
TPR_2
Motif
Other DBs
NCBI-GeneID:
108331783
NCBI-ProteinID:
XP_017422191
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Position
4:complement(33302497..33320146)
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AA seq
682 aa
AA seq
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MDSIPFRDGNIHAILDSRYLNSPLDVNHTLQTHSSLIRRLSQERELEGHLGCVNAVAWNS
KGTMLISGSDDTRINIWSYSGRKLLHSIDTGHTANIFCTKFIPETSDELVASGAGDAEVR
LFNLSRLSGSGSSDNSIIAPSALYQCHARRVKKLAVENGNPNVVWSASEDGTLRQHDFRE
GTSCPPAGSSHQECRNILLDLRSGSKRSLGDPPKQVLSLKSCDISSTRPHLLLVGGSDAF
ARLYDRRMLPPLSSCRKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSPDGHEVLLSYS
GEHAYLMNVNHAGMNEMQYTSGDVSKMMTYSPIVNGIELQSCVSNVFPNGFPIKKNIAAK
LDKCRKLIKYAKKSLDNGIPYYGIEACNEVLNGYSHIIGSALKHECLCTRAALLIKRDWK
NDAHMAIRDCYAARKIDNSSYKALFYMSEALSQLGRHEDALDFAVASHSLAPLKSEVAER
VENVKKDIALAEAEKNSKANDGASRSDIRGGRILSLSDILYRPEANGDVPQDGSRSDRDD
SDYDEELELDFETSISGDEAQDLDSNILHGSLNVRIHRRGDSRDNAGASGPSDSPSSSSQ
SSRTCYLPEPAVDMKQRFIGHCNIGTDIKQANFLGQRGPLSFWNHLECTTFLRVRYACVH
LNVLKAKGLLIFVCWVLYSVDW
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggattccattccctttcgcgatggcaacatacacgcgattcttgactctcgatatctc
aactcgccactggatgttaatcacactttgcagactcattcctctctcattcggaggctt
tctcaagaaagggagttagagggccaccttggctgtgtcaatgcggtggcttggaattcg
aaaggtacaatgttgatatccggatcagatgatactcggatcaatatttggagctattct
ggtagaaaacttctacattcaattgatacaggacatacagcaaatatattctgtactaag
tttataccagaaacttctgatgagcttgtagcctctggagccggagatgctgaagtccgt
ttatttaacttgtctcgcctaagtggaagtggatctagcgacaattcaatcattgctcca
tctgcactttaccaatgccatgctcgaagagtcaagaaattggctgttgaaaatggcaac
cctaatgtagtttggagtgctagtgaagatgggaccttgagacaacatgattttcgggaa
ggtacctcttgtcctccagctgggtcttcacaccaagagtgtcgaaatattcttcttgac
ttacgaagtggttctaaaagatcacttggtgatcctcctaaacaagtcctttctttaaag
tcttgtgatattagttcaactaggccgcatttgctccttgttggtgggagtgatgccttt
gcacggttatatgatagaaggatgctgccacctctaagctcatgtcgaaaaagaatgtct
cctcctccttgtgttaattatttttgtccaatgcatctttctgatcgtggacatccaagc
ttacacttaactcatgttacattcagtcctgatggacatgaggttctcctcagctatagt
ggagagcatgcttacctgatgaatgtaaatcatgctggaatgaatgagatgcaatatact
tcaggtgacgtatcaaagatgatgacttactctcctatagttaatgggatagagttgcag
tcttgtgtgtctaatgtcttcccaaacgggtttcctattaaaaagaacattgctgcaaag
cttgacaagtgcaggaaactgataaaatatgctaagaaatcattggacaatgggataccc
tattatggaatcgaggcatgtaatgaggttttgaatggctatagccatatcattgggtct
gcgcttaaacatgaatgcttgtgcactcgtgctgcactattgatcaagagggattggaaa
aacgatgctcatatggctataagagactgctatgctgctagaaaaattgataattcctcc
tataaagcactattctacatgtcagaagcactgtcacagttgggtagacatgaagatgct
ttggattttgctgttgcttcccattcactggccccactcaaatctgaagttgcagagaga
gtagagaatgtgaagaaggatattgcgttagctgaagctgaaaaaaatagcaaggccaat
gatggtgcatcaaggtctgacattcgaggtggaagaatattatcattaagtgacatactc
tatcgccccgaggctaatggtgatgttccacaagatggttctagatcagacagggatgat
tctgattatgatgaggaattggagctggactttgaaacatcaatatctggtgacgaggca
caagatcttgattcaaatattcttcatggaagtttaaatgttagaattcaccgaagaggt
gactctagagacaatgcaggtgctagtggcccaagcgattcaccttcatcttcgtcacag
agcagtagaacatgttatttgcctgaaccagctgttgatatgaaacagagatttattggc
cattgcaatattgggacggacataaaacaggccaattttcttggtcaaagaggccctttg
agcttttggaaccatttagaatgcacgactttcctgagggttcgttacgcttgcgtccat
ttgaatgtgctcaaagctaaaggtttgctaattttcgtttgctgggtactctattcagtt
gactggtaa
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