Vigna angularis (adzuki bean): 108331792
Help
Entry
108331792 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
var01009
]
108331792
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
var03009
]
108331792
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108331792
Protein phosphatases and associated proteins [BR:
var01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108331792
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
Pre-60S particles
Helicases
108331792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108331792
NCBI-ProteinID:
XP_017422214
LinkDB
All DBs
Position
4:complement(4305523..4313795)
Genome browser
AA seq
598 aa
AA seq
DB search
MGVKKLSQGVKNEGNGSNDNVFASCSFSSLGLDSNLCEQLHERLGFEVPTLVQAQAIPVI
LSGRHALVNAATGTGKTAAYLAPIVHLLQGYENRIQRSDGTFALVLVPTRELCLQVYEIL
QKLLHRFHWIVPGYIMGGENRSKEKARLRKGISILIATPGRLLDHLKNTTSFLHLNLRWI
IFDEADRILELGFGKDIEEILDLLGSRKTMHDDPKNTVTRNSKIQRQNLLLSATLNEKVN
HLAKISLDNPVMVGLDDKKIAQISTAVSNDHSESDGDNEDQYSSKMPTVGDYKVPVQLIQ
RYMKVPCGSRLPVLLSIIKHLFEREPSQKVVVFFSTCDAVDFHYSLLSEFQFSSYSQAEG
TRQKFLGCKIFRLHGNMVQEDRRTSFQTFKTEKSALLLSSDVSARGLDFPKVRCIIQYDS
PGEATEYVHRVGRTARLGEKGESLLFLQPVEIDYLQDLEKHGVSLTEYPILKVLDSFPLY
GQKNYTKKSVFLDSHPWVLCLQKALEAFIMSKAEVDKLAKKAFCSWVRAYTAHRGELKRI
FMIKKLHLGHVAKSFALKQQPSLVGQSFQKQAKKRKRFERKTGVSKKRKVGSVTERRP
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaagaagcttagtcagggagtgaaaaacgagggtaatggcagcaacgacaac
gtttttgcttcatgctccttctccagccttggccttgattccaatttgtgtgaacaactt
catgagaggttggggttcgaagttccgacgctggtacaagctcaagcgattcctgttatt
ctctctgggcgtcatgcactggtgaatgctgcaacgggcacggggaagactgctgcgtat
cttgctccgattgttcatctcttgcagggttacgaaaatcggattcagcgctctgatgga
acatttgcgttggttcttgtaccgacgcgtgagctatgtttgcaggtttatgaaattctt
cagaagttattgcatcgatttcattggattgttccaggatatattatgggtggagaaaat
agatcaaaggagaaagccaggctgcgcaaaggcatatcaattcttatagcaactcctggg
cgtcttctagatcacttgaagaacacaacatcattcttgcacttaaatctgcgctggata
atttttgatgaagctgatcggattttggaattaggatttggaaaagatatagaggaaata
ctagatcttttaggttcaaggaaaacaatgcatgatgacccaaagaatacagttacaaga
aactctaaaattcaaagacagaatttgcttttatctgccaccttaaacgagaaagtgaac
caccttgctaaaattagtctagacaatccagtgatggttggtcttgatgataagaaaata
gcacaaatttcaacagctgtaagcaatgaccattcagaatctgatggagataatgaagac
cagtattccagtaaaatgccaacagttggagattacaaagttcctgtacagttgattcag
agatacatgaaagtgccttgcggttcacgactacctgtacttctttcaattataaagcat
ctctttgaaagggaaccttcgcaaaaggttgttgtattcttttcaacatgcgatgcagta
gattttcactattcactgttgagtgaatttcaattttcatcctattcacaagcagaaggg
acccgacagaagtttcttggatgcaaaatttttcggttacatggtaatatggtgcaggag
gaccggagaaccagttttcagacctttaaaactgagaaatctgctttgcttttgtctagt
gatgtttctgctagaggcctggattttccaaaggttagatgcatcatacaatatgattct
cctggagaagctacggaatatgttcatagggttggtagaactgcccgactgggtgaaaaa
ggagagtcgttgctatttctgcaaccagttgagatagactatttacaggacttggaaaaa
catggtgtctcactcacagagtatcctatcctcaaagtgttggatagttttccactatat
ggacaaaagaactacacaaagaaatcagtgttcttagattcacatccctgggtcctttgt
ctccagaaggcacttgaagctttcatcatgtcgaaggccgaggtagataaacttgctaag
aaagcattttgctcttgggttcgtgcatacacagcacatcgtggtgagttgaaaagaata
tttatgatcaagaaacttcacttggggcacgtagcaaaaagctttgcattgaaacagcaa
ccttctttagttggacagtcattccaaaagcaagctaagaagagaaagagatttgagagg
aaaactggggtgtcaaaaaagagaaaagttgggagtgtgacagaacgcagaccatga
DBGET
integrated database retrieval system
