Vigna angularis (adzuki bean): 108331809
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Entry
108331809 CDS
T04660
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03020
RNA polymerase
var03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108331809
09124 Replication and repair
03420 Nucleotide excision repair
108331809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108331809
03400 DNA repair and recombination proteins [BR:
var03400
]
108331809
Enzymes [BR:
var01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108331809
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108331809
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108331809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
108331809
NCBI-ProteinID:
XP_017422240
UniProt:
A0A0L9UAY7
LinkDB
All DBs
Position
4:complement(3529928..3541578)
Genome browser
AA seq
1197 aa
AA seq
DB search
MDLEEEQEYEEQMMEDEEDEDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQ
EIVDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMMTESDGETATLFPKAAR
LRNLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKD
LTELGECPYDQGGYFVINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQN
RPPSTMFVRMLSRTSSKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDILEHICYD
FSDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHV
GIGEYCETKKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKL
TRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNR
LTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYI
TVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWMGIHRDPDMLVRTLRKLRR
RVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGG
WHDLVSKGFIEYIDTEEEETTMISMTINDLVQARINPEEAYSDTYTHCEIHPSLILGVCA
SIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLH
FRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKED
FGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQALRYTRR
DHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYT
QEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNI
SKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILT
RQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLK
KNSFECRGCKNKTDIVQVFIPYACKLLFQELMAMAIAPRMLTKDVKSKKKDQKKKGA
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggatttggaagaggagcaggagtacgaggagcaaatgatggaggacgaagaggacgag
gacgaggacgagatcacgcaggaagacgcgtgggccgttatctcggcgtacttcgaagag
aaaggcctcgttcgtcagcagctcgattccttcgacgagttcatccaaaacaccatgcag
gaaatcgtcgatgagtctgctgacattgaaattcgacctgagtctcagcacaatcctggt
caccaatccgatttcgcagagactatttataaaatcagtttcggtcagatttacttgagt
aagcctatgatgacagagtctgatggagaaactgccaccttgtttcccaaggctgctagg
ttaaggaatcttacgtattcagctcctctgtatgttgatgtctctaagagggttataaag
aaggggcatgatggtgaagaggtcactgagactcaggatttcaccaaagttttcattggc
aaggttcctataatgcttcggtctagttactgcacattataccagaattcagagaaggat
ttgactgagcttggggaatgcccatatgatcaaggtgggtatttcgttattaatgggagt
gagaaagttctgattgctcaggagaagatgagcaccaaccatgtctatgtctttaagaag
aggcagccaaacaagtatgcctacgtggctgaagttcggtccatggcagagtcacagaac
agaccacccagtactatgtttgtgcgcatgctttctcggactagttccaaagggggttct
tcaggacaatatatacgtgccactcttccttatattcgaactgaaattcccatcattatt
gtgtttcgagcattggggtttgttgctgataaagatatattagagcatatatgctatgac
ttttcggacactcaaatgatggagttgctacgtccttctctggaagaagcgtttgtaatt
caaaatcaacaggttgcacttgactacattgggaaaagaggagccactgttggtgtaacc
aaggaaaagagaattaagtatgctaaggagatccttcaaaaggagatgcttcctcatgtt
ggcattggggaatattgtgagaccaagaaagcttactattttggatatatcattcaccgg
ttactactctgtgcacttgggcggagagctgaggatgatagggatcattacggaaacaag
aggctggatctggccggtcctttacttggtggcctatttagaatgctattcagaaagcta
acaagagatgtcagggcgtatgtacagaagtgtgttgataatgggaaagatgttaatctg
caatttgctatcaaagcaaaaaccatcacaagtggccttaaatactcacttgctactggt
aattgggggcaagcaaatgctgcagggactagagctggagtttcacaggtgctgaaccgc
ttaacctatgcatccactttatcgcacttgcgaagactgaattccccaatagggcgtgaa
gggaagttggccaaaccaagacaattgcataattcacaatggggaatgatgtgtccagca
gaaacacccgaaggacaagcctgtggactggtgaagaacctggcattgatggtctacata
acagttggttcagctgcatatcctattctagagtttttggaagaatggggcacagagaat
tttgaggaaatttctcctgcagtgattccccaagcaacaaaaatttttgtaaacggttgc
tggatgggtatccatcgtgatcctgatatgttggtgagaacattaagaaagctgagacga
cgggttgatgttaacactgaagttggggttgtcagagatatccgtcttaaagagttgcgt
atatatacagactatggtcgttgcagtcgtcctttattcattgtggataagcaaaggctt
ctcataaagaagaaggatatccatgctttacaacaaagggaatcccctgaagagggtgga
tggcatgatctagtgtccaagggctttatagaatatattgacacggaagaagaagagact
acaatgatttccatgacaattaatgatcttgtacaagctaggatcaatccagaagaagca
tattctgatacgtatactcattgtgaaatccacccatcactgattttgggtgtatgtgcg
tccatcataccatttcctgatcacaatcagtccccacgtaatacgtatcagtctgcaatg
ggaaagcaagcaatgggaatatatgttaccaactaccagtttcggatggacaccttggcc
tatgttttatattatccacaaaagccattggtcactacaagagccatggagcatcttcat
ttccgtcaactcccagctggaattaatgccatcgtggccatttcctgttattctggttac
aatcaagaagattctgtgatcatgaaccaatcatcaatagaccgagggttctttcggtct
ctgtttttccgttcatatagggatgaagagaagaagatgggaaccctagtcaaagaagat
tttggccgtccagatagagctaacaccatgggaatgagacacggttcttatgataagctg
gatgatgatggtcttgcaccaccaggcacaagagtatctggagaggatgttattattgga
aagaccaccccaatatctcaagaggaggcacagggacaagctttacgatacactaggcgt
gatcacagcataagcttacgtcacagtgaaactggaattgttgatcaagttttgctgaca
acaaatgctgatggattgagatttgtgaaagtacgagtgagatctgttcgtataccacag
attggtgacaaattcagtagtagacatggtcagaagggtactgttggtatgacttatacg
caagaagacatgccctggactgtggaaggcatcacccctgatattattgtcaatccacat
gccattccttctcgaatgacaattggtcagcttatcgagtgtatcatggggaaggtggca
gctcacatgggaaaagaaggagatgctactccttttacagatgttactgtggacaatatc
agcaaagctctacacaaatgtgggtatcaaatgcgtggtttcgagactatgtacaatggt
catacaggtagacgtctcagcgcaatgattttccttggtcctacatattatcaaagactg
aagcacatggttgacgacaagatccattctcgtggtcggggtcctgtgcagatcctcaca
aggcaacctgctgagggacggtcacgagacggaggtcttcgatttggagagatggaacga
gattgcatgatagctcacggagctgctcacttcctgaaggaaaggttgtttgatcaaagt
gatgcatatagggttcatgtatgtgagcaatgtgggttgatagctattgcaaatctcaag
aagaattcctttgagtgcagggggtgcaaaaacaaaactgacattgttcaggttttcatt
ccgtatgcttgtaaactcctcttccaagagttaatggctatggctatagctccaagaatg
cttacaaaagacgtcaaatctaaaaagaaggaccaaaagaagaagggagcctga
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