Vigna angularis (adzuki bean): 108331859
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Entry
108331859 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 27
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108331859
03009 Ribosome biogenesis [BR:
var03009
]
108331859
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108331859
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108331859
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Helicases
108331859
Pre-60S particles
108331859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
AAA_22
POP1_C
Motif
Other DBs
NCBI-GeneID:
108331859
NCBI-ProteinID:
XP_017422330
UniProt:
A0A0L9UBK3
LinkDB
All DBs
Position
4:7373233..7379414
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AA seq
543 aa
AA seq
DB search
MAEAEDKDTSSPERENQTKINKKKLRKRKRPNKSENKQEEKNDAKIDSTLTQTEDAEEEE
EKEETKVNTNDSCGIMSSEFFSSLTLSEATSKAIADMGFDRMTQIQARAIPSLLIGKDVL
GAARTGAGKTLAFLVPAVELLYNAQFTLLNGTGVVVICPTRELAIQTHAVAKELLKYHSQ
TLGLVIGGAGRKGEAERIVKGVNLLVATPGRLLDHLQNTRGFIYKNLKCLMVDEADRILE
ANFEEEMKQIINILPKKRQTALFSATQTKKVEDLARLSFQTTPIFIDVDDGRKKVTNEGL
QQGYVVVPCAKRFVVLYSFLRRYQSKKVMVFFSSCNSVKFHADLLKCAGLDCLNIHGKQK
QHARTTTFFNFCKAEKGILLCTDVAARGLDIPDVDWIVQYDPPDEPKEYIHRVGRTARGE
GAKGNALLFLIPEELKFLHYLKAAKVPVKEYAFDHKKLANVQSHLEKLVAGIYHLNNMAK
EAYRSYILAYNAHSMKDIFNVHRLDLLAVATSFCFSNPPKVNLNIDSSASKHRKKVRKLE
GKR
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagcagaagacaaggataccagctcgcctgagcgcgaaaaccaaaccaaaatt
aacaagaagaagcttcgcaagagaaaaagaccaaataaaagcgagaataaacaagaggag
aaaaacgatgcgaagattgatagcacgctgacacaaacagaagatgcagaagaggaagaa
gaaaaagaagagacaaaggtgaacactaacgattcatgtggaatcatgagttccgagttt
ttctcctctcttaccttgtccgaagctacttccaaagccattgcggacatgggcttcgac
cgtatgactcagattcaagcgcgggcgattccgtcgctactgatcggaaaggacgtgctg
ggtgcggcgagaacgggtgctgggaaaaccctagcgtttttggttccggcggtggagttg
ctgtacaatgctcagttcactctgctcaatggaacgggtgttgttgtcatatgtccgacg
agagagctcgcgattcagacgcacgccgtggcgaaggaactgctgaagtaccattcgcaa
acgctcgggttggtgattgggggtgcggggcgaaagggagaggctgagcgcattgtgaaa
ggggtaaacctattggtggcgacgccgggtaggctcctcgatcatcttcaaaacacgagg
gggttcatatataaaaacttgaagtgcctaatggtggatgaagctgacaggatattggaa
gcaaactttgaggaggagatgaagcagataattaacatacttccaaagaaaaggcaaaca
gctttgttttcagccacacagacaaagaaggttgaggatcttgcccgcttatcttttcag
acaactcctatctttattgatgtagatgatgggagaaaaaaggtcacaaatgaaggattg
caacagggttatgttgttgttccctgtgctaagcgttttgttgttctctactcattcttg
aggagatatcaatcaaaaaaagtgatggtttttttctcttcgtgcaactctgtcaaattc
cacgcagatcttctcaagtgcgctgggttggactgcttaaatattcatggaaaacaaaaa
caacatgcccgtactactacgttcttcaacttctgcaaagctgaaaaggggatcttgctc
tgtactgatgttgctgctcgtggacttgacattcctgatgtggactggattgtgcagtat
gatccacctgatgaaccaaaggaatatatccatagggttggtagaacagctcgtggggaa
ggtgcaaagggaaatgctttactttttctgattcctgaagaattgaaatttcttcactat
ttgaaggcagcgaaggttcctgtgaaagagtatgcatttgatcataagaagctggcaaat
gtacaatctcatctggagaagttggtagctggcatttatcatttgaacaatatggctaaa
gaggcatatcggtcatatatattagcatataatgcacattctatgaaagatatattcaat
gttcaccgcctagatttactggctgttgctacttcattttgtttttcaaacccaccgaag
gtgaatctgaacatagatagcagtgcttcaaagcataggaagaaagtacgcaaactggaa
ggaaagagatga
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