Vigna angularis (adzuki bean): 108331860
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Entry
108331860 CDS
T04660
Name
(RefSeq) pre-mRNA-splicing factor SLU7 isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108331860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108331860
Spliceosome [BR:
var03041
]
Complex C
Other components
Step II factors
108331860
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
108331860
NCBI-ProteinID:
XP_017422331
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All DBs
Position
4:41994097..41999452
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AA seq
534 aa
AA seq
DB search
MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP
SLKHQRKWKSDPNYTKSWYDRGAKIHQADKYRKGACENCGAMTHDVKSCMERPRKVGAKW
TNTHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARKKYLKEQQLKKLE
KSNQNGEDAASDEDDEEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRIRE
DTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYGGDNQYRNSGQALEFKELNIHA
WEAFEKGQDVHMQAAPSQAELVHKSFLIRSEELKHQTKKTIIEKYGNAADENKPPRALLL
GQTEMQVEYDRAGRIIKGQEAAVPRSKYEEDIYINNHTTVWGSWWKDHQWGYKCCKQTIR
NSYCTGAAGIEAAEAASDLMKANIARKEAATEDPAPVEEKKLATWGTDVPDDLVLDEKLL
ADALKKEDLRKREEKDERKRKYNVRWNDEVTEEDMEAYRMKKVHHDDPMKDFLH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgcttcagtggcatttaagtccagggaggaccatcgcaaacagattgagttg
gaggaggcacgaaaagcggggcttgcaccagctgagcttgatgaggatgggaaggaaatc
aaccctcatattccccagtatatgtcatctgcgccatggtatcttaatgccgagagacct
agtttgaaacatcaaagaaaatggaaatctgatcccaattacaccaaatcatggtacgat
agaggtgctaaaatccaccaggctgacaagtataggaaaggcgcatgcgaaaattgtgga
gctatgacgcatgatgtgaagtcatgtatggaaagaccacgaaaagtgggagcaaaatgg
acaaacactcacattgcccctgatgaaaagatagaaacttttgagcttgactatgatgga
aaacgggacagatggaatggttatgatgcgtcaacttatgctcgagtcattgagaggtat
gaagctagagatgaagcacgaaagaagtacctgaaagaacaacaacttaagaaattggag
aagagcaaccaaaacggtgaggatgctgcaagtgatgaggatgatgaggaagatgatcta
agggtagatgaggcaaaggttgatgagagcaaacaaatggactttgcaaaggttgagaag
cgtgtgcgtacaacaggtggtgggagtacaggaactgtgaggaatttacgtattcgagaa
gatactgcaaaatatcttcttaatcttgatgtcaattcagcacattatgatcccaagacc
agatccatgcgagaggatccacttccagatgcagatccaaatgaaaaattttatgggggt
gataaccaatatagaaatagtgggcaagctttggaatttaaggagttgaacatccatgct
tgggaagcatttgaaaagggacaagatgttcacatgcaagcggccccatcacaagctgaa
ttagtccataagagtttccttatccggagtgaggagctgaagcatcaaacaaagaaaacc
attattgagaagtatggcaatgctgctgatgagaacaagcctccaagagcacttctgctt
ggccaaactgaaatgcaagttgagtatgatcgtgctggtagaataattaaaggccaggaa
gcagctgttcccaggagcaagtatgaagaagatatttacattaacaaccacacaactgtg
tggggttcatggtggaaggatcaccagtggggctataagtgctgcaagcaaacaattcga
aatagctattgcactggtgccgctggtattgaggctgctgaagctgcaagtgatcttatg
aaagctaatattgcccgaaaggaggctgctacagaggatcctgcacctgtggaggagaaa
aagcttgctacgtggggtactgatgttccagatgatttagttctagatgagaaattgctt
gctgatgcactcaagaaggaagatctaaggaagagggaagaaaaagatgagaggaaacgc
aagtataatgtcagatggaacgatgaggttactgaagaggatatggaagcatacagaatg
aagaaagtacatcatgatgatccaatgaaagatttcctacactga
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