Vigna angularis (adzuki bean): 108332044
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Entry
108332044 CDS
T04660
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108332044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108332044
03110 Chaperones and folding catalysts [BR:
var03110
]
108332044
03029 Mitochondrial biogenesis [BR:
var03029
]
108332044
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
var04147
]
108332044
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
108332044
Messenger RNA biogenesis [BR:
var03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
108332044
Chaperones and folding catalysts [BR:
var03110
]
Heat shock proteins
HSP60 / Chaperonin
108332044
Mitochondrial biogenesis [BR:
var03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
108332044
Exosome [BR:
var04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108332044
Exosomal proteins of other body fluids (saliva and urine)
108332044
Exosomal proteins of breast cancer cells
108332044
Exosomal proteins of colorectal cancer cells
108332044
Exosomal proteins of bladder cancer cells
108332044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF4404
Motif
Other DBs
NCBI-GeneID:
108332044
NCBI-ProteinID:
XP_017422632
LinkDB
All DBs
Position
1:complement(29536043..29544373)
Genome browser
AA seq
588 aa
AA seq
DB search
MSSYIHSHVFLSSLFFPPNGNPSSSFPPFRLNQMAFGVRIAPRFVVRAGPKKILFGKECR
EAMQAGIDKLADAVSLTVGPKGRNVILSESGNLKVINDGVTIARSIELSDAIENAGAILI
QEVASKMNELAGDGTSTAIILARAMIKSGLLAVSFGANPISLKKGMDKTVKELVKLLKER
SVPVEGREHIKAVASISAGNDDYVGNLIADAMGKIGPDGVISIESSSTSETSVIIEEGMK
IDKGYMSPYFITNQENSIVEFDWAKVLVTDQKISSVKEIVPLLEKAMQLSVPLLIIAEDI
TRQVLETLVVNKTQGLLRVAVVKCPGFAGGKKALLQDIALMTGADFLSGDLGLTLDGATS
DQLGTALKVTITSNATTIIADPSTKAEVQARISQIKKDLSETDNANLSRKLSERIAKLLG
GVAVIKVGAHTELELEDRKLRIEDAKNATFAAISEGIVPGGGATYVHLSDLIPTIRNSME
DLDEQIGADIVAKALIEPAKSIATNAGIDGDIVVQKTRTYDWRIGYNAMTGIYEDLLNAG
VADPSRVARCALQSAVSVAGVILTTQAILVDKIKKPKPAVPFIPGITP
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctatatacattctcacgtctttctctcctcgctcttcttccctcccaatgga
aacccttcttcttcattcccaccttttcgtttgaaccaaatggcatttggggttcgtata
gctccgcgctttgtggtgagggcaggccctaagaagatattattcggcaaggagtgcaga
gaggccatgcaagccgggattgataagctcgccgatgctgtctctcttaccgttggaccc
aaaggacgaaatgttattctttctgaatctggaaaccttaaagtgattaatgatggcgtt
acaattgctcgatccattgagctttcagatgcaattgagaatgcaggtgccatcctaatt
caagaggttgcaagtaaaatgaacgagttagctggtgatggtactagcactgcaattatt
ttggctcgtgccatgattaaatctggactattagcagtttcttttggagctaatcctatt
tctttgaagaaggggatggacaagactgtaaaggagttggtcaagttattgaaggagaga
agtgttcctgttgaagggagggagcatattaaagctgtagcatcaatttctgctggaaat
gatgattatgttggcaacttgattgctgatgctatggggaagattggtccggatggggtg
atctctattgagtcctcctcaacatctgaaacctctgtgataattgaagaagggatgaag
atcgataagggttacatgtctccttacttcattacgaaccaggagaattccattgtagag
tttgattgggctaaagttttggtaactgatcaaaagatttcaagtgtaaaagaaatagtc
ccattgttagagaaggctatgcagttgagtgttccactcttaattattgctgaggatata
acaagacaagtgctggaaacattagtagtgaacaagacgcaaggattactaagagttgca
gttgtaaaatgtccaggatttgcaggtgggaagaaagctttgttacaagatattgcacta
atgaccggtgctgattttctttctggagacttgggtctcacacttgatggtgcaacatca
gaccagcttggtacggcactgaaagtgacaataaccagtaatgcgacaactatcattgcc
gatcctagtactaaggcggaagttcaggccagaatttcacagataaagaaagatcttagt
gaaacagataatgcaaacttgtcaagaaagctctcagagagaattgcgaaactgttgggt
ggtgttgctgttataaaggtaggtgcacatactgagctagaacttgaagatagaaaactg
agaattgaggatgcaaagaatgcaacatttgctgccataagtgagggcattgttcctgga
gggggtgccacatatgtccacctgtcggacttgataccaacaataaggaactccatggaa
gatctagatgagcaaattggtgctgatatcgtagcaaaggcactcattgaacctgcaaaa
tcaattgcaactaatgcaggaatagatggagacattgttgtccaaaagactagaacatat
gattggagaatcggatataatgcaatgacgggcatatatgaagatcttttgaatgctgga
gtagcagatcctagtcgtgttgcaagatgcgctcttcaaagcgcagtgtctgttgctggt
gtgattctaaccactcaagctatattggtggataaaataaagaaacccaaaccagcagtg
ccctttatccctggcataactccctaa
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