Vigna angularis (adzuki bean): 108332072
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Entry
108332072 CDS
T04660
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108332072
03009 Ribosome biogenesis [BR:
var03009
]
108332072
Enzymes [BR:
var01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108332072
Spliceosome [BR:
var03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108332072
Ribosome biogenesis [BR:
var03009
]
Eukaryotic type
90S particles
Helicases
108332072
Pre-60S particles
108332072
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
PBP1_TM
CMS1
Cas3-like_C_2
Helicase_C_2
SPD3_N
Motif
Other DBs
NCBI-GeneID:
108332072
NCBI-ProteinID:
XP_017422667
UniProt:
A0A0L9UII8
LinkDB
All DBs
Position
4:42444235..42448582
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AA seq
558 aa
AA seq
DB search
MVVGRVAVPNPPSGLFHNPSSAATLIPPHIRLLSFSASAAASSSSSSANRTRHTSTTKSD
SPFSTFGRVKTQKPKTLLHKSRDRRRALQVEEEEEDDNDDYDDNDDYYDNLAAPRGRPSR
SGSRSGGRKRGGWDIIPRFPSQAKSTTDTNFFSLKSFKEIGCADYIIQSLQKIFLTRPSH
VQAMAFAPVLSGKTCVIADQSGSGKTLAYLAPIIQRLRQEEQEGRSQSSSQAPRVLVLAP
TAELASQVLDNCRSLSKSGAPFKSMVVTGGFRQRTQLENLQHGVDVLIATPGRFLYLMNE
GFLQLTNLRCAVLDEVDILFGDEDFEMALQCLINSSPVDTQYLFVTATLPKNVFTKLVEV
FPDCEMIMGPGMHRISSRLEEILVDCSGEDGQEKTPDTAFLNKKTALLQLVEESPVPRTI
VFCNKIETCRKVENSLRRFDRKGNHMQVLPFHAAMTQESRLASMEEFTRPPSKGVSQFMI
CTDRASRGIDFAGVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLASK
IMERSQKGHPLHDIPTAY
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggtggttgggagagttgctgttccaaatcctccctccggtctgttccacaatccttct
tctgctgccaccctcatacctccacacattcgtcttctctctttctccgcttccgccgcc
gcctcctcctcttcctcctccgccaatcgcactcgtcacacgtccactacaaaaagcgat
tctcccttctcaacgttcggaagagtcaagactcagaaaccgaaaactctgctccacaaa
agcagggaccgaagacgcgcccttcaagttgaagaagaagaagaagacgataatgatgat
tatgatgataatgacgactactatgacaatctcgcagccccaagaggaagaccttctcgt
tctgggtctcggtcaggtggacgaaaacgaggaggatgggatatcattcccaggtttccc
tcacaagccaaatcaaccactgacacaaacttcttcagtctcaagtcatttaaagaaatt
gggtgcgctgactacatcattcaatccctccaaaaaatcttcttaacgcgcccttcccat
gtacaggccatggcatttgctcctgttcttagcggaaagacttgtgtcatagctgaccaa
agtggttctggaaagacattagcttatcttgcaccaatcattcagcgtcttagacaagaa
gaacaagaaggacgtagtcaatcctcttcgcaagctcctagagtgctggtactcgcaccc
actgcagagttagcctctcaggtcttggataattgtcgatccttgtcaaaatctggggct
ccattcaaatctatggttgtcacgggaggttttcgacaacggactcaactggaaaattta
cagcacggagttgatgtcttaatagcaacgcctggccgttttttgtacctcatgaatgaa
ggcttcttgcagttaacaaatctaagatgtgctgtgttggatgaggtagatattctcttt
ggtgatgaggactttgaaatggctcttcaatgcctgatcaattcttcaccggttgacaca
cagtatctatttgtgactgcaactttaccaaaaaatgttttcaccaaattggttgaagtt
tttcccgactgcgaaatgattatggggcctggtatgcatcgaataagttctcgccttgaa
gagattctagtagattgcagtggagaagatggacaagaaaaaactccggatacagcattt
ttgaacaagaaaaccgcacttctgcagcttgtggaggaaagtcctgttccaagaacaatt
gtgttctgcaacaagattgaaacatgcagaaaagttgaaaattcattaaggcgttttgat
agaaaaggaaatcacatgcaagttctacccttccatgctgccatgacacaagaatcacgg
cttgctagcatggaagagtttactcgtcctccatcaaaaggagtctcccagttcatgatt
tgcactgacagggcttcacgaggtattgactttgcaggagtggatcatgtcatactcttt
gacttcccacgtgatccaagtgaatatgtacgtcgtgttggaagaacagccagaggtgcg
aagggagtaggaaaggcatttatatttgtggttggcaagcaagtatcccttgcaagcaaa
ataatggaaagaagtcagaagggtcacccactacatgatatacctacggcatattag
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