Vigna angularis (adzuki bean): 108332087
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Entry
108332087 CDS
T04660
Name
(RefSeq) serine/arginine-rich splicing factor SR34A isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108332087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108332087
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
SR proteins
108332087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Transformer
RRM_7
RRM_3
QWRF
Motif
Other DBs
NCBI-GeneID:
108332087
NCBI-ProteinID:
XP_017422684
UniProt:
A0A8T0KI76
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All DBs
Position
4:26219732..26225431
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AA seq
263 aa
AA seq
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MSGRFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKIPPRPPCYCFVEFDNARDAED
AIRGRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGSGGAGAGAGAGGGRFGISRHSEFR
VIVRGLPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKYAIRKLDDTE
FRNPWARAYIRVRKYESSRSRSRSRSPRSPSRSRSPKRARSRSLERSVSRSRSRSRSASP
IKSSRPRSRSRSGSPRQVLSGSG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgagtggccggttttctcgcacaatttacgtcggcaacctgccttctgacatcagagag
tcagaaattgaagatctcttctacaagtatggtcgtataatggatattgaattgaagatt
cctccccgccctccatgttattgttttgttgagtttgataatgctcgagatgctgaagat
gcaattcgaggtagagatggatacaactttgatggttgtcggttacgggtggaacttgct
catggcggtagaggaccatcgtcaagtgatcgacgtggatatggaggaagtggtggggct
ggggctggggctggggctggtgggggtcgttttggcatctcacgccattctgaatttcga
gttattgttcggggactcccatcttctgcatcctggcaagatttgaaggatcatatgcga
aaagctggtgatgtttgttttgctgaggtttctcgtgatagtgaagggacttttggcatt
gttgattacactaattatgacgacatgaagtatgctattcgcaaactggatgacaccgag
tttagaaatccttgggcgcgagcctatattcgggtgagaaagtatgagagtagtcgttct
aggagccgcagcagaagccccagaagccccagcaggagtaggagtccgaaaagggccaga
agtagatccttggagcgttctgtgtctaggtcacgatctagatcacgatcagcatcacca
atcaaatcttcaaggccaagatcacgctcacggtctggatctcctcgccaggtgctgtca
ggtagtggatga
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