Vigna angularis (adzuki bean): 108332121
Help
Entry
108332121 CDS
T04660
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108332121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108332121
03036 Chromosome and associated proteins [BR:
var03036
]
108332121
Transcription machinery [BR:
var03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108332121
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108332121
PBAF complex
108332121
GBAF(ncBAF) complex
108332121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
C1_2
LpxC
NA-iREase2
DUF4428
Motif
Other DBs
NCBI-GeneID:
108332121
NCBI-ProteinID:
XP_017422735
LinkDB
All DBs
Position
4:29301110..29305962
Genome browser
AA seq
537 aa
AA seq
DB search
MEVTKDPNSNPGRLDDSDPELELYTIPSSSRWFAWDEIHETERTAFKEFFDASSISRTPK
IYKEYRDFIINKYREEPSRRLTFTEVRKSLVGDVTFLHKAFHFLENWGLINYGAPPAADA
EKEEEEEEPCKVRLEEGTPNGIRVAATPNSLKPMLLPRGAKTSANATGASLKLPPLASYS
DIYRDLIRQKEGNCGLCGGKCGSGHYRCTQDNFIICANCFKSGNYGEKRSAEDFVLSESS
ENSGKHDTVWTEGEILLLLESVLKHGDDWELVAQSVQTKTKLDCISKLIELPFGELMLGP
AHRNVNVSGANGIVVNNAKQVQSSSSDYQEISKTKDQPPELTKEIEQNGDAVKESPSKRQ
RVTPLSDSSGSLMNQVGLISNVVDPHITAAAADAAVSALCDENLCPREIFDVEEDSARDL
EGEGLEMERSSISEIPLPLRVRAATATALGAAAARAKLLADQEVREIEHLVATIIKAQID
KLLHKVKHFDDLELLMEKEHAEMENLKDSILTERIDVLRRTFRSGITRWKDYSYVKS
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcacaaaagatcctaactcaaacccgggtcgcttggacgattcagatcccgaa
ctcgaactctacaccatcccaagctcttcaagatggttcgcgtgggacgaaattcacgaa
acggagagaacagcattcaaggaattcttcgacgcgagctcgatttcgagaacgcccaag
atatacaaagaatacagagacttcatcatcaacaagtacagggaagagccttccaggagg
ctcacattcaccgaggtcagaaaatcgctggttggtgacgtcacgtttctgcacaaggcg
ttccatttcctagagaattggggcttgatcaactacggcgccccccctgctgcagacgca
gagaaggaggaggaggaggaggagccgtgcaaagttcgcctcgaagaaggaactcccaat
gggattcgggtggcggccacaccgaactcgttgaagccgatgttgttgcctcgcggtgcg
aagaccagtgcaaatgcgaccggggcttctctcaaattgccgccgctcgcctcctattcg
gatatttatagggatttgattaggcagaaagaggggaactgtggactttgtggtggcaaa
tgtggttcaggacattaccgttgtacccaggataatttcattatttgtgcaaattgtttc
aaaagtgggaattatggggagaaaaggtctgcagaggatttcgtattgagtgagtcaagt
gaaaacagtggcaagcatgacactgtctggactgagggagaaattcttctccttttggaa
tctgttttgaagcatggggatgactgggaactggttgctcaaagtgttcaaaccaagact
aaacttgattgtatctcaaaactcattgagctgccttttggagagctcatgttgggccct
gctcacagaaatgtcaacgttagtggtgctaatggtatcgtggtgaacaatgcaaaacaa
gttcagtcatcttcatctgactaccaagaaatttcaaaaacaaaggatcaacctcctgag
cttacaaaagaaattgagcagaacggagatgctgtgaaggaaagtccttcaaaaagacag
cgtgttactcccctgtcagattccagtggttcactaatgaatcaggtgggactgatctct
aatgtggttgaccctcatatcacagctgctgcagctgatgctgctgtttcagctctttgt
gatgagaatttgtgtccaagggagatatttgatgttgaagaagattcagcaagagatctt
gagggagaaggtttagagatggagaggtcctctatatcagaaatacctttgccactgcgt
gtaagagccgccactgcaactgctcttggagctgctgctgctcgagcaaagttgttggca
gaccaggaagtcagagagattgaacatttagtggcaactataattaaagctcagatcgat
aagttgctgcacaaggttaaacattttgacgatctggagctgttgatggaaaaggaacat
gctgaaatggaaaacttaaaagattctatcttgactgaacggattgatgtgttaaggaga
acatttagatctggaatcactagatggaaggattattcgtatgtaaaatcttag
DBGET
integrated database retrieval system
