Vigna angularis (adzuki bean): 108332166
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Entry
108332166 CDS
T04660
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B
KO
K07466
replication factor A1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03030
DNA replication
var03420
Nucleotide excision repair
var03430
Mismatch repair
var03440
Homologous recombination
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108332166
03420 Nucleotide excision repair
108332166
03430 Mismatch repair
108332166
03440 Homologous recombination
108332166
03460 Fanconi anemia pathway
108332166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
var03000
]
108332166
03032 DNA replication proteins [BR:
var03032
]
108332166
03400 DNA repair and recombination proteins [BR:
var03400
]
108332166
Transcription factors [BR:
var03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108332166
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108332166
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108332166
MMR (mismatch excision repair)
108332166
DSBR (double strand breaks repair)
HR (homologous recombination)
108332166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Prefoldin_3
DUF1415
Motif
Other DBs
NCBI-GeneID:
108332166
NCBI-ProteinID:
XP_017422827
UniProt:
A0A0L9TRK5
LinkDB
All DBs
Position
1:8683284..8686600
Genome browser
AA seq
617 aa
AA seq
DB search
MAAKSITPDGVSTLLANPSPDSLSDLPDIVVQIVDLKPSGNRYMFSASDGKKKLRAILPS
NMYSEVLSGNIQNLGLVRILDYTLNDIPNKSEKYLIVTKCEPVSPALENEIKCEEPGILL
KPKEEVGLKTDGDAGIVLKLKQEVVTKSAAQILNDQHRNSAPAARLAITRRVRPLVSLNP
YQGNWTIKVSVSNKGNMRTYKNARGEGCVFNVELTDEEGTQIQATMFNDAARKFYDKFVL
GKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEVAGEASFVPETKFSFVQIDQLGP
YVNKSELVDVIGVVKNVSSTMSIRRKSDNESIPKRDITIADETKKTVVVSLWNDLATNTG
QDLLDIADQSPVVAIKSLRVGDFQGVSLSTISRSVILVNPDVPEAKKLRSWYESEGKDAS
MDSVGSGSSPTSNNGIRSVYTDRVPLAHITSDQSLGETKPAFFSVRGYISFIKPDQAMWY
RACKTCNKKVTENIGSGYWCEGCQKSDEQCSLRYIMVAKVCDTSGEAFFSVFNQEAEKIV
GCSADALDDLKSQEGEDNPYNLKLKQGTWVPHLFRVSVTQNEYNNEKRQRITVRAVVPVD
FAAESRMMLEEISKMRA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaaatcgatcacacccgacggcgtttcgacgctcctcgccaacccttcccca
gattctctgtcggatcttcccgacattgttgttcaaatagttgatctcaagcccagcggc
aacagatacatgttctcggccagtgatgggaaaaagaaactgagggcaattcttccttcg
aatatgtattccgaggttctctctgggaacattcaaaacctaggtcttgttcgaattctt
gattacactctcaatgacatccctaacaaatctgaaaagtaccttattgtcacgaaatgt
gagccggtatctcccgctcttgaaaatgagatcaagtgcgaggagcctggtattcttttg
aaacccaaagaagaggttggattgaagactgacggtgatgctggtattgttttgaagcta
aagcaggaagtggtgacaaaatctgctgcgcagattctaaatgatcaacatagaaattcg
gctcctgctgcacgcttggcaattacgcgtagggtgcgtccactcgtttcgttgaatcct
tatcagggtaattggacgataaaagttagcgttagtaacaaaggaaacatgcgtacctat
aagaacgctaggggtgaaggttgtgtattcaatgttgaattgacggacgaagaaggtact
cagatccaggcaaccatgtttaacgatgccgccagaaaattttacgacaaatttgttctg
ggaaaggtttattatatttcgaaggggacactaaaagttgccaacaaacagttcaaaact
gttcaaaatgattatgaaatgacgctcaacgagaattctgaggtggaagaggtggcgggt
gaagcaagttttgtcccggaaacaaaatttagctttgtccagattgatcagctaggccct
tatgtcaacaagtctgaacttgtggatgtaattggagttgttaagaatgtgtcttcaaca
atgagcattcgtaggaagagtgacaatgagagcattccaaagcgcgacattactatcgct
gatgaaacgaagaagacggtagttgtgtcgttgtggaatgatcttgctactaacacagga
caagatttactggacattgctgatcaatctccagttgttgcaatcaagtctctaagggtt
ggggacttccaaggtgtttctttgtcaactataagcagaagtgtaattctggtaaaccca
gacgtacccgaagcaaagaaactcagaagctggtatgaatctgaaggcaaagatgcttca
atggactctgtaggttctggttcaagtccaacatctaataatggaattagatcagtgtac
actgatcgtgttccacttgctcacataacctccgaccaatcattgggagagacgaagcct
gcgtttttcagcgttagaggatatataagcttcataaagcctgaccaagcaatgtggtat
cgtgcctgtaagacatgcaataagaaagttactgaaaacattggttctggatattggtgc
gaaggatgccagaaaagcgatgaacaatgcagtttaaggtatattatggttgccaaggtt
tgcgatacaagtggtgaggctttcttctccgtctttaatcaggaagctgagaagattgtt
ggatgctctgcagatgctttagatgaccttaaatcacaagaaggagaagataatccttat
aatctgaaattgaagcaaggaacttgggttccgcatcttttccgcgtcagtgttacccag
aacgagtataataacgagaagcggcaaaggataacggttcgagcagttgttcctgttgac
ttcgctgctgaatcaaggatgatgctggaagaaatatcaaagatgagagcataa
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