Vigna angularis (adzuki bean): 108332430
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Entry
108332430 CDS
T04660
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108332430
09122 Translation
03013 Nucleocytoplasmic transport
108332430
03015 mRNA surveillance pathway
108332430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108332430
03041 Spliceosome [BR:
var03041
]
108332430
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
108332430
Spliceosome [BR:
var03041
]
Common components
Common spliceosomal components
Cap binding complex
108332430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
108332430
NCBI-ProteinID:
XP_017423181
LinkDB
All DBs
Position
11:8872427..8876066
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AA seq
257 aa
AA seq
DB search
MALLFKDPSKLSAYRDRRFPGTQEDFEHALQTSSTVYVGNMSFYTTEEQVYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDTEDACKYISGTILDDRLIRVDFDWGFQDGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEVQRQLVDYGTGSLGSFPPVIPSSYGRHG
GGHGHGHGHGGSHRHGRDYYRKRHRDDDRHTHESSKRTSDHDSRRNTDHESRPEKNPRFR
ESGDSDDEEEDDRKRRA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgttattcaaggatccgtcgaagctttcggcgtatcgagaccgaagatttccc
ggaacgcaagaggattttgagcatgcccttcagacttcatccacggtttacgttgggaac
atgtccttttacacaacggaggagcaagtttacgaactcttctctcgcgctggggaaatc
aagaagatcattatgggtttggacaagaacaccaaaacaccctgtggcttctgtttcgtt
ttatattattctcgtgaagatactgaggatgcttgcaaatacataagtgggacgatactg
gatgatcgtcttattcgtgttgattttgattgggggttccaggatggaagacaatggggt
cgtgggaggagtggtggccaggtccgggacgagtatcgtactgattatgatcctggtaga
ggaggttatgggaagctggtccagaaagagttagaagtacaaaggcagcttgtagattat
ggcactggttctttgggttcctttccaccagttattcctagttcctatggtagacacggt
ggaggtcatgggcatggacacggtcatggtggttctcatcggcacggtagagattactat
agaaagagacaccgagatgatgatcgccacacacacgagtcctcaaaaagaacttcagat
cacgattctcggaggaacactgatcatgaatctagaccggaaaaaaatccacggtttcgt
gagagtggtgattctgatgatgaggaggaagatgatagaaaaagacgggcttaa
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