Vigna angularis (adzuki bean): 108333915
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Entry
108333915 CDS
T04660
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X2
KO
K08734
DNA mismatch repair protein MLH1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03430
Mismatch repair
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108333915
03460 Fanconi anemia pathway
108333915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
var03400
]
108333915
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
108333915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
108333915
NCBI-ProteinID:
XP_017424910
UniProt:
A0A8T0JJS2
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Position
11:20280018..20308300
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AA seq
731 aa
AA seq
DB search
MEDTEIESEPLSRMEPPKIQRLSDSVVNRIAAGEVIQRPVSAVKELLENSLDACASSVNL
LIKDGGLKLIQVSDDGHGIRFEDLPILCERHTTSKLSAFEDLQRIKSMGFRGEALASMTY
VGHVTVTTITKDQLHGYRVSYRDGVMEHEPKPCAAVKGTQIMVENLFYNMAARKKTLQNT
SDDYSKIVDLVSRFAIHHMKVSFSCRKHGAVRADVHTVATSSRLEAIKSVYGVSVVRNLI
EIEASDDDMSSSVFEMHGYMSNANYAAKKITMVLFINDRLVECSALKRAIEIVYAATLPK
ASKPFIYISIVLPPENVDVNVHPTKREVSLLNQEVIIEKIQSVVESTLRSSNEARTFQEQ
TTAQSPLPRINISKEVDLSPIPTGSRPLKVPVHKMVRTDSLDPAGRLHAYTQITSDRNLE
MSASLNAVRSSIRQRRNPKDSLELTSVQQLLDEINSNCDPGMMDIVRHCTYVGMADDVFA
LLQHNTCLYLANVVNLSKELMYQQVLSRFGHFNAIQLNDPVPLKDLIILALKEEDLDSDC
NDDDTLKDKIAEMNTELLKQKSEMLEEYFGIHIDEHGNVSRLPVILDQYTPDMDRVPEFA
LCLGNDVDWEDEKSCIQTISAALGNFYAMHPPMLPNPSGEGFLFYKKRKMMDDCVEENTH
DNIGSDVIDNKVEHELLSEAETTWAQREWSIQHVLFPSMRLFFKPPVSMATDGTFVQVTS
LEKLYKIFERC
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagacactgagatcgagagcgaacccttgtcccgcatggagcctcccaaaatccag
cgcctgagtgactccgtcgtcaaccgaatcgccgccggcgaggtcattcagcgtcctgtc
tccgccgtcaaggagctcctcgagaacagcctcgacgcctgcgcctcctccgtcaatctc
ctcatcaaggatggcggcctcaaactcatccaagtctccgacgacggccacggaatccga
tttgaggacttgccgattctgtgcgagcgccacacgacgtccaagctctccgcgtttgag
gacttgcagcgcatcaagtcgatgggattccgcggcgaggctctcgctagcatgacctat
gtcggtcacgtcaccgtcaccaccattaccaaagaccagttgcacggttacagggtgtcc
tacagagatggtgtcatggagcacgaacccaagccatgtgctgctgttaaaggaacacag
ataatggttgagaatctgttttataacatggctgcaaggaagaagacactgcagaatact
tctgatgattattcaaagattgtagacttggtaagccgatttgctattcatcacatgaaa
gtcagtttctcttgcagaaagcatggagctgttagagctgatgttcacactgttgccacg
tcttcaaggctagaagccatcaaatctgtttatggtgtctcagttgttcgcaacctgatt
gaaattgaagcttcagatgatgatatgtcttcttcggtttttgagatgcatggctacatg
tccaatgcgaattatgctgcaaagaaaatcacaatggtgcttttcatcaatgatagactg
gttgagtgctctgcattgaagagagctattgaaattgtttatgcagcgacattaccaaaa
gcttctaagcccttcatatatatctcaattgttttaccacccgaaaatgttgatgtcaat
gtacatccgacaaagagggaggtgagccttttaaatcaggaagtcatcattgagaagata
cagtcagtggttgaatcaacattgaggagttccaatgaggcaaggacatttcaagaacaa
actactgcacaatctccactacctcgtattaatataagtaaggaggttgacctcagccct
attccaacaggttcaagaccattgaaagttcctgtacataagatggttagaacagattca
ttagatcccgctggaagattacatgcctacacacaaattacgtctgatagaaatcttgaa
atgagtgctagtttgaatgctgtgaggtcttccattagacaaagaaggaacccaaaagat
tctctagaactcacaagtgttcaacaacttcttgatgagataaatagcaattgtgatcct
ggcatgatggacattgtaaggcattgcacatatgttggaatggcagatgatgtttttgct
ttgcttcaacataatacctgtctttatcttgcaaatgttgtgaacttgagcaaagaactc
atgtatcagcaagttctcagccgttttggccatttcaatgccattcaactaaatgatcca
gttcccttgaaagacttgattatattggcactcaaggaagaggacctagattcggactgt
aatgatgatgacacattaaaagacaagattgcagaaatgaacacagaactgctgaaacaa
aagtctgaaatgctggaggaatatttcggcattcatattgatgagcatggaaatgtctct
agacttcctgtgatacttgatcaatacactccagacatggatcgggtcccagagtttgct
ctttgtttgggcaatgatgttgactgggaagatgaaaagagttgcattcaaacgatttca
gctgctctgggaaacttctatgctatgcatccaccgatgttacccaatccatctggtgaa
ggttttcttttttacaagaagagaaaaatgatggatgactgtgttgaagagaatacccat
gataatatcgggagtgacgtgattgacaataaagttgaacatgaactactttctgaagct
gagactacttgggcccagcgcgaatggtcaatacaacatgtgctttttccttccatgaga
ctctttttcaaaccacctgtttctatggctactgatggaacctttgtacaggtaacttcg
ctggagaaactgtataagatttttgaaagatgttag
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