Vigna angularis (adzuki bean): 108333942
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Entry
108333942 CDS
T04660
Name
(RefSeq) vacuolar sorting protein 18 isoform X2
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04142
Lysosome biogenesis
var04145
Phagocytosis
var04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108333942
04142 Lysosome biogenesis
108333942
04148 Efferocytosis
108333942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108333942
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108333942
Hops complex
108333942
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
Clathrin
VPS18_RING_C
zf_RING_Vps8
RPN1_RPN2_N
zf-RING_11
zf-RING_Vps41
Nup54_57_C
zf_RING_Vps8_fungal
zf-RING_5
zf-RING_UBOX
TXNDC16_2nd
zf-C3HC4
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
108333942
NCBI-ProteinID:
XP_017424954
LinkDB
All DBs
Position
11:complement(8055685..8073674)
Genome browser
AA seq
992 aa
AA seq
DB search
MDQGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVIGTSKGWVIRHDFGLGNSSEIDLTV
GRPGDQSIHRVFVDPGGSHSIATVVGPGGAETFYTHAKWNKPRILSKLKGLVVNAVAWNK
QQITEVSTKEVILGTENGQLHELYVDEKDKKEKYIKFLYELRELSEAFMGLQMETATIIN
GTRYYVMAVTPTRLYSFTGFGSLETVFSGYLDRTVHFMELPGDIPNSELHFFIKQRRAVH
FAWLSGAGIYHGGLNFGGQQSSSGGNENFIENKALLDYSKLSEGAEVVKPSSMALSEFHF
LLLLGNKVKVVNRISENIIEELQFDQTSDSASKGIIGLCSDATAGLFYAYDQNSIFQVSI
NDEGRDMWKVYLDMNEYAAALANCRDPFQRDQVYLVQAEAAFSSRDYFRAASFYAKINYI
LSFEEVTLKFITAGEQDALRTFLLRKLDNLEKSDKCQITMISTWATELYLDKINRLLLED
DSASENSNLEYQSIIKEFRAFLSDSKDVLDETTTMKLLESYGRVEELVYFASLEGHYEIV
VHHYIQQGESKKALELLQKPDVPIDLQYKFAPDLIALDAYETVESWMATKNLNPRKLIPA
MMRYSSEPHAKNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDSSLLRFLQCKF
GKGPENGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDSELAMAEAD
KVEDDEDLRKKLWLMIAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL
IDDFKEAICSSLEDYNKQIEQLKEEMNDATRGADNIRNDISALAQRCTVIDRDEECGVCR
RKILAVGRDVGMGRGFTLVGQMAPFYIFPCGHAFHAQCLIAHVTRCTVDSQAEYILDLQK
QLTLMGSETKRESNGTLSPEESIPSMSTVDKLRSQLDDAIASECPFCGDLMIREISLPFI
HPEEEQHVLRSWEIKPIAGNQNQRNTSLPISG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagggaggcaggtattcacagtggaccttcttgagcgatatgctgcaaaaggt
cgtggagttatcacttgcatggctgccggaaatgatgtcattgtgattggaaccagcaaa
ggatgggtcatcaggcatgattttgggcttggcaattcatctgagattgatctcactgtg
ggtcgtcctggggaccaatcaatccacagggtttttgttgatcctggagggagtcacagt
attgccactgttgttggtcctggaggagctgaaactttctatactcatgccaaatggaac
aagccacgaattttgagcaagctgaaaggacttgttgtgaatgctgttgcatggaacaaa
caacagataactgaagtttccacaaaggaagttattcttggtactgaaaatggtcaactt
cacgagctgtatgtggatgagaaggataagaaagagaagtacatcaagtttctctatgaa
ttaagagaactttctgaagcttttatgggcttgcagatggaaacagctaccataattaat
gggactaggtattatgtgatggcagttactcctactcgtctttactctttcactggcttt
gggtcactagaaactgttttttcaggttatttagatcgtactgtgcattttatggaactt
cctggtgacataccaaacagtgagttgcattttttcattaagcaacggagagctgtacat
tttgcatggctttctggagctggtatttaccatggtggcttaaattttggaggacaacag
agttcttcaggtggaaatgaaaattttattgagaacaaagctcttttggactactccaaa
ttgtctgaaggagctgaagtagttaaaccaagttcaatggcattgtctgaattccatttc
ttgttgcttctggggaataaggttaaggttgtaaacagaattagtgagaacattattgag
gaacttcagtttgatcaaacttctgattcagcatcaaagggtattatagggttgtgtagt
gatgccacagctggtttgttttatgcatatgatcaaaactccatctttcaggtgtctatc
aatgatgagggccgagatatgtggaaggtatatcttgacatgaatgaatatgctgctgct
ttagcaaattgccgtgacccttttcaaagagaccaagtatatttagtgcaggctgaagct
gcattttcttctagagattattttagagctgcatctttctatgccaaaatcaattatatt
ttatcatttgaagaggtcactttgaagttcattactgctggtgaacaggatgctttgaga
actttcttattgcggaagcttgataatttagaaaagagcgacaaatgccaaataacaatg
atatccacttgggcaactgaattgtatttggacaagataaaccgactgctcttggaagat
gactctgcatcagagaatagcaatttagagtaccaatcaatcattaaagagtttcgtgct
tttctcagtgacagcaaggatgtattggatgaaacaactacaatgaaacttttagaaagt
tatggaagagttgaagaattggtatattttgcgagcttagaagggcactatgagattgta
gttcaccattacattcagcaaggtgaatcaaagaaagcattggaattgcttcagaaacct
gatgtgcctatagatctgcagtataagtttgccccggaccttattgcccttgatgcatat
gaaactgtggagtcatggatggctacaaagaatctgaacccaaggaaactgattcctgca
atgatgcgctattcaagcgaaccacatgcaaagaatgagacacatgaagtcattaaatat
cttgaatattgcgttcatcgattacataatgaagaccctggagttcataacctgctactt
tctttgtatgcaaaacaggaagatgatagttcacttctacgtttcctacaatgcaaattt
ggtaaaggaccggaaaatggtcctgagttcttctatgatcctaagtatgccttgcgtctt
tgcctaaaggaaaaacgaatgcgagcatgtgttcatatatacagcatgatgtctatgcac
gaagaagcggttgcccttgccctacaggttgattcagagcttgctatggctgaagctgac
aaggttgaagatgatgaagatttgagaaagaaactctggcttatgatagctaagcatgtt
gttgaacaagaaaagggaactaagagggaaaacattaggaaggcaattgcatttcttaaa
gaaactgatggcctgctaaagattgaggacatattaccattctttccagattttgcgctg
attgatgacttcaaggaggctatatgctcctcattggaggactacaataagcaaattgaa
cagcttaaagaagagatgaatgatgcaacccgcggtgctgacaacatcagaaatgatatc
agtgcacttgctcaaagatgcactgttattgatcgagacgaggaatgcggggtctgccga
cggaaaattctagctgtggggagggacgtaggcatgggtcgaggttttacattagtagga
caaatggctcccttttacatcttcccgtgtggacatgccttccacgcacagtgcctgatt
gcccatgtgactcgttgtacagttgattcccaggctgagtatatactggatctgcagaaa
caactgactttgatgggcagtgaaacaaaaagagaatccaatggcaccctttctccagag
gagtccattcctagcatgagcactgtagacaagctccggtcacaactggatgatgctata
gctagtgaatgcccattttgtggtgatctgatgatccgtgagatttctttgccttttatc
catcccgaggaagagcaacatgtgctacgatcatgggagataaaaccaatcgctggaaac
cagaaccagagaaatacgtcgttacctatatctggatga
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