Vigna angularis (adzuki bean): 108333945
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Entry
108333945 CDS
T04660
Name
(RefSeq) protein STABILIZED1
KO
K12855
pre-mRNA-processing factor 6
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108333945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
var03041
]
108333945
Spliceosome [BR:
var03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108333945
Complex C
U5 SnRNP specific factors
108333945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_16
HAT_Syf1_CNRKL1_C
ubiquitin
GAT
PMC2NT
Motif
Other DBs
NCBI-GeneID:
108333945
NCBI-ProteinID:
XP_017424961
UniProt:
A0A0L9UMW8
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All DBs
Position
11:complement(8394202..8400681)
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AA seq
1039 aa
AA seq
DB search
MVFIASPNHKTLAIYVNPNTTTLHHLKLAIQQTLTLPISQQRLFLSQSHRLSAANDGDDS
VLISDLGVGPYSTLTLHIPLLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTRS
DIGPARAAPDLPDRSATTIGGTAGAGRGRGKPGEEEDDDEGEDKGYDENQKFDEFEGNDV
GLFASAEYDEDDKEADAVWEAIDKRMDSRRKDRREARLKQEIEKYRASNPKITEQFADLK
RKLYTLSSDDWQSLEKFESGGYSSRNKKKRFESFVPVPDTLLEKARQEQEHVTALDPKTR
AANGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLSDSVSGMTNVDPKGYLTVLNSMKIT
SDAEISDFKKARLLLKSVTQTNPKHPPGWIAAARLEELAGKLQAARQLIQKGCEECPKNE
DVWLEACRLATPDEAKAVIARGVKSIPNSVKLWMQAAKLEHDDANRSRVLRKGLEHIPDS
VRLWKAVVELANEEDARLLLHRAVECCPLHVELWLALARLETYDNAKKVLNRARERLSKE
PSIWITAAKLEEANGNTSMVGKIIERGIRALQREGLVIDREAWMKEAEAAERAGSVATCQ
AIVHNTIGIGVEEEDRKRTWVADAEECKKRGSIETARAIYAHALTVFLTKKSIWLKAAQL
EKSHGTRESLDALLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEE
IWLAAFKLEFENHEPERARMLLAKARERGGTERVWMKSAIVERELGNIEEERRLLDEGLK
QFPSFFKLWLMLGQLEEQLAENAKRLDQTEKRLDHMREAKKVYESGLKNCPNCVPLWLSL
ANLEEEMNGLSKARAVLTMARKKNPQNPELWLAAVRAELKHGYKKEADILMAKALQECPN
SGILWAASIEMVPRPQRKTKSVDAIKKCDHDAHVIAAVAKLFWHDRKVDKARTWLNRAVT
LAPDIGDFWALCYKFELQHGTEENQKDVLKRCIAAEPKHGEKWQVISKAVENSHQPTESI
LKKVVVALGKEENAAENKH
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttatcgcatcacccaaccacaaaaccctagccatatacgtaaaccctaacacc
accactctccatcacctcaaacttgcgatccaacaaaccctaaccctcccaatttctcaa
cagcgcctcttcctctctcagagtcaccgattatcagccgctaatgacggcgatgattcg
gttctcatctccgatctcggcgtcggaccctactcgaccctaacccttcacattcccctc
ctaggcggcaccaatcctccggctgtccccaaaccccgcttcgatttcctcaactccaag
ccccctccgaactatgtcgccggacttggccgtggtgccactggcttcaccactcgttcc
gatattggtcccgcaagggccgcccctgacctccccgaccgctccgccacaactattggc
ggaaccgccggcgccgggcgggggcgagggaagcccggtgaggaggaggatgacgacgag
ggcgaggacaaaggctatgacgagaatcaaaagttcgacgagtttgaagggaatgatgtt
gggttatttgcctctgcggaatacgatgaggatgacaaagaagcagacgcagtttgggaa
gccattgacaagaggatggattcacggaggaaggataggagggaggccaggttgaagcaa
gagattgagaaatatcgtgcctcaaaccctaagatcaccgaacagtttgctgatttgaag
aggaaattgtatactctttcttctgatgattggcagagtcttgagaagttcgagagtggg
ggttattcgtccagaaacaagaagaagaggttcgagagttttgtgcctgtgcctgatact
cttcttgagaaggcaaggcaggaacaagagcatgtcacagcgttggatcctaagactagg
gcagctaatggaacggagactccatgggcacaaaccccagttacggatttgactgccgtg
ggtgagggtagaggtactgtgttatctttgaagttggataggctgtcagattcggtttct
gggatgacgaatgttgaccccaaggggtatttgaccgtgcttaatagtatgaagattacc
agtgatgctgaaatttcggatttcaagaaggctaggttgctactaaaaagtgtcactcag
acaaatccgaagcaccctccaggctggattgctgctgcaaggctggaggaattggcaggg
aagcttcaggcagctaggcagttgatacagaaagggtgtgaggagtgtcccaagaacgag
gatgtgtggttggaggcttgtaggctggctactccggatgaggcaaaggcggtgattgca
aggggtgttaagtcgattcccaattcggtgaagttgtggatgcaggctgcgaaattggag
catgatgatgcaaacaggagtagggttttgaggaaggggttggagcacattcctgattcg
gttaggctgtggaaggccgttgtggagcttgctaatgaggaggatgctaggcttttgctt
cacagggccgtggagtgttgtcctttgcatgtcgaactctggcttgcgcttgcgaggttg
gagacttatgacaatgctaagaaggttctgaatagggcgagggagaggctatccaaggaa
ccatctatatggataacagctgcgaagttggaagaagctaatggcaatacttccatggtt
gggaagatcattgaaaggggtataagggctttgcagagggaaggtttagtgattgatagg
gaagcttggatgaaggaagcagaggcagcggagcgagctgggtcggttgcaacttgccaa
gcaatagtacataatactattgggattggagttgaagaagaagataggaagaggacatgg
gttgctgatgcagaggaatgcaagaaaaggggttctattgagactgccagagctatttat
gctcatgctttgactgtcttcttaactaaaaagagcatatggctcaaagcagcgcagctg
gaaaagagtcatggtaccagggaatctctggatgcattacttcgcaaagcagttacatac
agaccacaggctgaagttctttggcttatgggtgccaaagagaagtggcttgctggagat
gtgcctgcagctcgtgctatcctccaagaagcttatgctgccattcccaattctgaggaa
atatggcttgctgctttcaagttagaatttgaaaaccatgaacctgagagagctaggatg
ttgttggctaaagctagagagagaggaggtacagaaagagtctggatgaaatcagctatt
gtggagagagagctggggaacattgaagaagaaaggagattgttagacgaaggtctgaag
caattcccttcattctttaaattgtggctgatgcttggccaactagaggaacagcttgcc
gagaatgcaaagcgacttgatcagactgaaaaacggcttgatcacatgagggaagcaaag
aaggtctacgaatctggactgaaaaactgtcctaattgtgtacctctttggctttctctt
gctaatcttgaagaggagatgaatggactgagtaaagctcgtgcagttctcacaatggct
agaaagaagaatcctcaaaaccctgaactctggctagctgctgttagagcggaattgaag
catggatataagaaagaagctgatattttgatggcaaaagcgttgcaggagtgtcctaac
agtggtattctgtgggcagcatcaattgagatggttccacgtccacaacgtaaaacgaag
agtgtggatgccatcaagaaatgtgaccatgatgcccatgttattgctgctgtcgccaaa
ttattctggcatgataggaaggtggacaaagctaggacttggttgaatcgggctgtgacg
ctagctcctgacattggggatttctgggcattgtgctacaaatttgaactacagcatgga
actgaggagaaccagaaggatgtattgaagagatgtattgctgctgaaccaaaacatgga
gagaaatggcaagtaatctcaaaggcagttgagaactctcatcaaccaacagaatccatc
ttgaagaaagtagttgttgcacttgggaaggaagagaatgcagccgagaataaacattga
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