Vigna angularis (adzuki bean): 108334013
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Entry
108334013 CDS
T04660
Name
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X2
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108334013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108334013
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
108334013
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108334013
Multi subunit type E3
ERAD complex
108334013
LMBR1L-GP78-UBAC2 complex
108334013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
CUE
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_16
PHD
zf-HC5HC2H
E3_UbLigase_EDD
zf-RING_Vps41
RINGv
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
108334013
NCBI-ProteinID:
XP_017425078
UniProt:
A0A8T0JFW4
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Position
11:complement(18717739..18726658)
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AA seq
585 aa
AA seq
DB search
MALRVIAVSAVSTFLSFVGLQFCTDLSLDKLRSDGLIGWNLIHLDDASQDIELPSGLYTT
IGLLLNCMINLFVLLNLCIKAVFFSELYASETRKLIERLVNYVIYKGTFLPLIVPPTIYQ
AGLWSTWLTVLCSLKMFQALARDRLERLNASPSATPWTYLRVYSALLFVFMADVLWIRLC
LTIYRTHGSSMYLLLFFEPFSIAFETLQAILVHGFQLLDIWLHHSACNRDFRSPKLLDTL
TAGSLLEWKGILIRNLGFFLDMATFFMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLSA
IVNRIKGFIKLRIALGTLHAALPDATTEELRAYDDECAICREPMAKAKKLNCNHLFHLAC
LRSWLDQGLTEMYTCPTCRKPLFEGVPENEASSDTGTMSSDEQLARQISAGLDRPNNARH
AMPTGLYPNQTLNTPEGVTWRGAGLDSGWLHSWPNQGVDGAGPSTAMRTVGLGRVQMMMR
HLASVGETYAQTAFEDSSWNLWPINPSQASASASTIPPPNGRSLGRTGSLHLRTASQPPN
DNVANMLAMAETVREVLPHIPDDMIFQDLQRTNSVMVTVNNLLQM
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctttgagggttatagcagtttcggcggtttctacatttctaagctttgtgggtctt
cagttctgcacagacttgtctttggataaacttagatcagatggactaataggctggaat
ttaattcacttggacgatgccagccaagacattgagttgccctcgggtttgtacaccacc
atagggctactgctgaattgcatgatcaatttatttgtccttcttaatctttgtatcaag
gctgtgtttttctcagagttatatgcttctgaaactcgtaaactgattgagcgtctagtt
aattatgtcatttacaagggaacatttctaccactgattgtgccaccaacaatttaccaa
gcaggtctttggtcaacttggttgactgtgctttgctcactgaagatgtttcaagcttta
gctagagatcgtttggaacggctgaatgcatctccatctgctacaccctggacgtatctt
cgtgtatattcggcattattatttgttttcatggctgatgttctctggataaggctttgt
ctgacaatatatagaacacatgggtcctctatgtatctgctattattctttgagcctttc
agtattgcttttgagaccctacaggctattttggtacatggctttcagttgcttgacata
tggctgcatcattcagcttgcaatagggatttccgatcacctaaactgcttgacacatta
actgcaggttcattgttggaatggaagggaattcttattcgtaacttggggtttttccta
gacatggctacatttttcatggcacttggccattacttgtatatatggaggcttcatggc
atggctttccatcttgtagatgcagtgctatttctaaatatacgtgcattacttagtgca
atagttaatcgcataaaaggctttatcaaactaaggatagctctaggaacacttcatgca
gctcttcctgatgcaacaacagaggagctaagagcgtatgatgatgaatgtgctatttgt
agagaaccaatggctaaggctaaaaagctaaactgcaatcatctcttccatcttgcatgt
ttaagatcttggttggatcaaggcctgactgagatgtatacttgtccaacttgtcgaaag
ccactttttgagggagtgcctgaaaatgaagcaagctctgacacagggactatgtctagt
gatgaacagcttgcacgccaaattagtgctggattagaccggccaaacaatgctagacat
gccatgcctaccggattgtatccaaatcagacactaaacactcctgaaggtgttacttgg
aggggtgcagggctggactcaggttggttgcattcttggccaaatcaaggtgttgatgga
gccggtccgtctactgctatgagaacagttggattgggaagagttcaaatgatgatgagg
catcttgcatctgttggagaaacctatgctcagactgcctttgaagattcttcttggaac
ctttggcccattaatccctctcaggcttctgcgagtgcttcaaccattcctccccctaat
ggaagatcattaggacgaactggtagtttacatttaaggactgcttcacagcctccaaat
gataatgtggctaatatgcttgccatggctgagactgttcgggaggttctacctcatatt
ccagatgacatgatattccaggacttgcaaagaacaaattctgttatggttactgtgaat
aatcttcttcaaatgtga
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