Vigna angularis (adzuki bean): 108334213
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Entry
108334213 CDS
T04660
Name
(RefSeq) nuclear pore complex protein NUP93A
KO
K14309
nuclear pore complex protein Nup93
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108334213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108334213
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108334213
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
TPR_12
TPR_7
TPR_2
TPR_1
PrmA
Motif
Other DBs
NCBI-GeneID:
108334213
NCBI-ProteinID:
XP_017425411
UniProt:
A0A0L9UPC2
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Position
11:962802..971864
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AA seq
860 aa
AA seq
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MANEDLSSWTDLLHSSTKLLEQAAPSAQFPPLQRNLDQLESLSKKIKSKTVRTEAPSQSI
AATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEAQ
KDNLRSFNDYMMKVLEEDWQKEKRDFLQSLSRISTLPRTNIAANSTLGTLPGQIASVSST
PQVSSGSSSMEIVPLTGRPIVEKKASVYAEVVKNLNKARKSGLPFKPAAAFKGAYENLGI
DASSGKSVTMRKIWHLVQMLMDEDSAPRVSKRMSLIIGARRHLEWGHEKYIMDTIQSHPA
QAALGGGVGNLQRIRAFLRIRLRDYGVLDFDASDARRQPPIDTTWQQIYFCLRSGYYDEA
RNIALSSRASHQFVPLLTEWINTGGMVPKETASTASEECEKMLRTGDRVGRTAYDKKKLL
LYAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPSGPSSIVLSDGLIPYSLDD
LQSYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLYLSKEAGDEGYNIDAVHLSIVL
ADHGVLSEGAGSGQKFGMMDAYAEVSTIIRQYGSMYLRLGDLQMALEFYAQAAAAVGGGQ
LSWTGRGNVDQQRQRNLMLKQLLTELLLRDGGIYLLLGARGSGEEGELGRFVTDPKAREQ
FLIEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAISSLFRGILDGESRTAGL
IHSGNEILETYTYYPDVSLQEREHVFEQQTVLRQLESILSIHKLARLGHYIDALREVAKL
PFLPLDPRSPDSAVEAFENLSSHVQACIPDLLKVALTCLDNVTDSDGSLRALRAKIATFI
ANNLKRNWPRDLYERVAQRL
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaagacttgagtagttggactgatcttctacattcttcaacgaagcttcta
gaacaagctgctccttctgctcagttccctccacttcagaggaacttagatcaactggaa
tccttatccaagaagattaaatccaaaaccgtaaggactgaggcaccctctcaatctatt
gctgcaacaaggctccttgctcgtgaggggataaatgcagagcaacttgcaagggatctg
aagtcatttgaactgaagacaacttttgaggatgtttttcctgtcgaggcaacaagtgtt
gaagagtatctgcagcaggttcatgaaatggcaatggtctctgccgtacaggaagcccaa
aaggataatctcaggagtttcaatgattacatgatgaaagttttagaggaggattggcaa
aaagaaaagcgtgatttccttcagagtttaagtcgaatttcaacattacctaggacaaac
attgctgctaacagcactctgggtaccctcccaggtcaaattgcatctgtgtcttctact
ccacaagtttcatctggtagttctagtatggagattgttcctctgactggcagacctatt
gtggagaaaaaggcatctgtgtatgcggaggtagtgaagaatctgaataaagcaaggaag
tctgggttaccatttaaacctgcagcagctttcaagggtgcatatgaaaatttgggcatt
gatgctagtagtggaaaatcagtaaccatgcgaaagatatggcaccttgttcagatgctg
atggatgaggactcagccccacgtgtttcaaaacggatgtcattgattattggtgcaaga
cgccaccttgaatggggacatgaaaaatacataatggacaccatacaaagccatcctgca
caagctgctcttggtggcggtgttgggaatttgcaaagaattcgtgcctttcttcggatt
cggttgagggattatggagtactggattttgatgccagtgatgctcggaggcagcctcct
attgataccacatggcagcagatatatttttgcctgaggtctggttattacgatgaagca
agaaatattgccctgtcttcacgtgcttcacatcaatttgttcctttgctcacagagtgg
attaatactggagggatggtcccaaaagagaccgcaagtactgcatcagaggaatgtgaa
aaaatgttgagaactggtgaccgggttggtcgaactgcatatgacaagaaaaagttactt
ttgtatgccatcatatcaggctcccgaagacatattgatcgcctgcttagagatcagcca
actctctttagtacaatagaagatttcttgtggttcaaattgtcagcagtgcgggattgt
cctagtggaccttcatccattgttctaagcgatggtctgattccgtacagcctggatgat
ttgcaaagttacctgaataaatttgagccctcatactatacaaaaaatggaaaagaccct
ctggtatatccctatatcttgcttttaagcattcagttgcttccagctgtattatacttg
tctaaggaagcaggagatgaaggatataacattgatgctgtacacctatcaattgtgcta
gctgatcatggggtcctttctgaaggtgctggttctgggcaaaagtttggaatgatggat
gcttatgcagaagtatccaccattatcaggcaatatggatctatgtatttgcgtcttggt
gatctccaaatggccctagaattttatgcacaagctgctgcagcagttggtgggggccag
ttgtcatggactggtagaggtaatgttgatcagcagaggcagagaaatctgatgctgaag
cagcttctcactgaactattattaagggatggaggcatatatcttttacttggtgcaaga
ggttcaggagaagaaggtgaattgggacgttttgtgaccgatccaaaagccagggaacaa
tttttaattgaagctgcatgccagtgtcaggaggctgggatgtatgacaaatctatagaa
attcagaagagagttggttccttctccatggctctagataccatcaacaaatgcctttct
gaagctattagttcccttttccgtggaatattagatggtgaaagccggactgctggcctc
attcattctggcaatgagattttggagacatatacttattatccagatgtcagtcttcaa
gagagagaacacgtttttgagcagcaaactgtgttacgacaacttgagtcaatattgtca
attcacaaattagcaagactggggcattatatcgatgcattaagggaggttgctaaactt
ccatttcttcctctagatcctcgaagccctgatagtgctgttgaagcgtttgaaaattta
tcttcacatgtccaagcttgtattccagatcttttgaaagttgccctcacatgtctggac
aatgtgacagactctgatggatcgcttcgtgccttaagggctaagattgcgacttttatt
gcaaataatttaaagaggaattggcctcgtgatttgtatgagagagttgcccagaggttg
tga
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