Vigna angularis (adzuki bean): 108334220
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Entry
108334220 CDS
T04660
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108334220
09122 Translation
03013 Nucleocytoplasmic transport
108334220
03015 mRNA surveillance pathway
108334220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108334220
03041 Spliceosome [BR:
var03041
]
108334220
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108334220
TREX complex
108334220
Spliceosome [BR:
var03041
]
Complex C
Other components
EJC/TREX
108334220
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108334220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_3
Btz
Motif
Other DBs
NCBI-GeneID:
108334220
NCBI-ProteinID:
XP_017425434
UniProt:
A0A0L9UNH7
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All DBs
Position
11:complement(3801577..3804057)
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AA seq
244 aa
AA seq
DB search
MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAANRAAPYATAKAPESAW
QHDMYADQPAAVAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH
YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAAPTVNGTF
GNPGGPPRSGQGRNGPLGRLRGAPRGRGGSRRGRGRGRGRDEKVSAEDLDAELEKYHAEA
MQLN
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctgctctggatatgacgctcgacgatattatcaagaacaacaagaagtcagcc
tccgccaacaccaggggccgaggccgagcttcgggacccggacctgctcgccgtctcccc
aaccgggccgcaaatcgcgccgcgccttacgccaccgctaaggcgccggagtctgcgtgg
cagcacgatatgtacgccgatcagccagccgccgtggctttcgcaggtcaaggtggtcgg
gcgtcttccatcgaaacagggacgaagctttacatatctaatctggattatggcgtttcc
aatgacgatattaaggagttatttcttgaagttggtgacctgaaacggcatactgttcat
tacgataggagtggaagatccaagggtacggcagaagtagtcttctctcgacgtgctgat
gctgtagctgcggtgaagaggtaccacaatgttcagctagacgggaaaccaatgaaggta
gagattgtggggacaaatatcgccacacatgctgcagcgcccactgttaatgggactttt
ggaaatcctggtggacctcccagaagtggacaagggagaaatgggccactaggaaggctg
cgtggtgcacctagagggcgaggtggcagtcggaggggtagaggacgtggtagaggtcgt
gatgaaaaggtatctgctgaagatctcgatgctgagttggagaagtatcatgctgaggct
atgcaattgaactga
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integrated database retrieval system