KEGG   Vigna angularis (adzuki bean): 108334220
Entry
108334220         CDS       T04660                                 
Name
(RefSeq) THO complex subunit 4A
  KO
K12881  THO complex subunit 4
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03013  Nucleocytoplasmic transport
var03015  mRNA surveillance pathway
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108334220
  09122 Translation
   03013 Nucleocytoplasmic transport
    108334220
   03015 mRNA surveillance pathway
    108334220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108334220
   03041 Spliceosome [BR:var03041]
    108334220
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     108334220
    TREX complex
     108334220
Spliceosome [BR:var03041]
 Complex C
  Other components
   EJC/TREX
    108334220
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108334220
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 Btz
Other DBs
NCBI-GeneID: 108334220
NCBI-ProteinID: XP_017425434
UniProt: A0A0L9UNH7
LinkDB
Position
11:complement(3801577..3804057)
AA seq 244 aa
MSAALDMTLDDIIKNNKKSASANTRGRGRASGPGPARRLPNRAANRAAPYATAKAPESAW
QHDMYADQPAAVAFAGQGGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDLKRHTVH
YDRSGRSKGTAEVVFSRRADAVAAVKRYHNVQLDGKPMKVEIVGTNIATHAAAPTVNGTF
GNPGGPPRSGQGRNGPLGRLRGAPRGRGGSRRGRGRGRGRDEKVSAEDLDAELEKYHAEA
MQLN
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtctgctgctctggatatgacgctcgacgatattatcaagaacaacaagaagtcagcc
tccgccaacaccaggggccgaggccgagcttcgggacccggacctgctcgccgtctcccc
aaccgggccgcaaatcgcgccgcgccttacgccaccgctaaggcgccggagtctgcgtgg
cagcacgatatgtacgccgatcagccagccgccgtggctttcgcaggtcaaggtggtcgg
gcgtcttccatcgaaacagggacgaagctttacatatctaatctggattatggcgtttcc
aatgacgatattaaggagttatttcttgaagttggtgacctgaaacggcatactgttcat
tacgataggagtggaagatccaagggtacggcagaagtagtcttctctcgacgtgctgat
gctgtagctgcggtgaagaggtaccacaatgttcagctagacgggaaaccaatgaaggta
gagattgtggggacaaatatcgccacacatgctgcagcgcccactgttaatgggactttt
ggaaatcctggtggacctcccagaagtggacaagggagaaatgggccactaggaaggctg
cgtggtgcacctagagggcgaggtggcagtcggaggggtagaggacgtggtagaggtcgt
gatgaaaaggtatctgctgaagatctcgatgctgagttggagaagtatcatgctgaggct
atgcaattgaactga

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