Vigna angularis (adzuki bean): 108334365
Help
Entry
108334365 CDS
T04660
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
108334365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108334365
03036 Chromosome and associated proteins [BR:
var03036
]
108334365
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108334365
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108334365
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
108334365
Noncanonical PRC1 (PRC1.1)
108334365
Noncanonical PRC1 (PRC1.3/1.5)
108334365
Noncanonical PRC1 (PRC1.6)
108334365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-UDP
zf-Nse
zf-RING_11
zf-C3HC4_5
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108334365
NCBI-ProteinID:
XP_017425649
UniProt:
A0A8T0JG63
LinkDB
All DBs
Position
11:8785788..8800471
Genome browser
AA seq
498 aa
AA seq
DB search
MPAQKRSLPDSLDEGDTSHHNLFHSRHAKQQQQQHQDQSHEHDADHHHEEEEQEEEEEGE
GEGEEDDDEEEEEDEEVEEAAHDNDGKETPQDSDETPSSGSEEKPEFVYVELLEIRKDVQ
CPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALI
AALYPDIEKYEEEELEFREEEKNRNKQIQASIAKVVQRQSEALVKRRKDTPGVFLTRSQR
NQRNIHSRRQSQTIEGSEDNEEDNDNNEKDSSSADERSTEHRQKRRKRWARVRPSQPSSS
MASADGGNDSDMDISRENRGISRQVSKHRKLTWGRGGFRSHTRHGSGGGSNSKSSRSSRL
SKFVDHLRSLDENTNEFDVRLMLVSLDHQNTPSLPQPYLCCRPTLSVEHLYEYVARQTPF
PVEGIEILAVKGCHSTNRDKSADENSALIYDELSTLVIEPHKDELEILQEHETLAGLRSK
CISKMGHLILAYRRKEVS
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccagaaacgctccctacccgactccctcgacgaaggggacacttcgcaccac
aacctcttccattctcgacatgcgaagcaacaacagcaacaacatcaggaccagtcgcac
gagcacgacgcggatcaccaccatgaagaggaggaacaagaggaagaagaagaaggggag
ggagaaggagaagaagatgatgacgaggaagaagaagaagacgaagaagtagaagaagcg
gcgcatgataacgacggcaaggaaacgccacaggattccgacgaaaccccatcttctggc
tctgaagaaaaacctgaatttgtgtatgtagaacttttggaaatacgtaaagatgtccaa
tgtccaatttgccttggcattatcaagaagacaagaactgtcatggaatgcttgcaccgc
ttttgcagggaatgcattgacaaatcaatgcgactggggaataatgaatgtccggcctgc
cgcacacattgtgccagtcgccgttcgctgagagatgatccaaattatgatgcccttatt
gctgctttatatccagatattgagaagtacgaagaagaggagctagaatttcgtgaagag
gagaagaaccgcaataagcagattcaagcttcaatagcaaaagtagttcaacggcaatca
gaagcacttgttaagagacggaaagatacaccaggagtatttctaacaagatcacagcgt
aatcaacgaaacattcattctaggagacaaagtcaaacaattgaaggatcggaagacaat
gaggaggacaacgacaataatgaaaaggattcatcttcagccgatgaacgaagtacagaa
cacaggcagaaaaggcgaaagagatgggctagagttcgcccctctcaaccctcatcatct
atggcaagtgcagatggaggcaatgatagtgacatggatataagtagagaaaatcgtgga
atttcaaggcaggtgtcaaaacatagaaagcttacttggggaagaggtggtttcagaagt
cacacacgacatggcagtggtggtggtagcaatagcaaaagttctcgcagtagtcgattg
tctaagtttgttgatcatctaagaagcttggatgaaaacactaatgagtttgacgtccgt
ctcatgcttgtttctcttgatcatcaaaatacaccaagtttgccacaaccttacctttgc
tgtcgaccaactttgtctgtggagcacctttacgaatatgttgctcgtcagacacctttt
ccagttgaaggaatcgagatactggcagtcaaaggatgccacagcacaaatcgtgacaag
tcagctgatgagaattcagccctcatatatgatgagctatcgacgctggttatagagcca
cacaaagatgaactggaaattttacaagaacacgagactctggcagggcttagatccaaa
tgcatatccaagatggggcatttgattcttgcatacaggcggaaggaagtatcatag
DBGET
integrated database retrieval system
