Vigna angularis (adzuki bean): 108334613
Help
Entry
108334613 CDS
T04660
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03030
DNA replication
var03420
Nucleotide excision repair
var03430
Mismatch repair
var03440
Homologous recombination
var03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108334613
03420 Nucleotide excision repair
108334613
03430 Mismatch repair
108334613
03440 Homologous recombination
108334613
03460 Fanconi anemia pathway
108334613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
var03000
]
108334613
03032 DNA replication proteins [BR:
var03032
]
108334613
03400 DNA repair and recombination proteins [BR:
var03400
]
108334613
Transcription factors [BR:
var03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108334613
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
108334613
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
108334613
MMR (mismatch excision repair)
108334613
DSBR (double strand breaks repair)
HR (homologous recombination)
108334613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
zf-CCHC
zf-CCHC_3
DUF223
zf-CCHC_2
BRCA-2_OB1
NGO_1070-like
DUF3570
Motif
Other DBs
NCBI-GeneID:
108334613
NCBI-ProteinID:
XP_017425980
UniProt:
A0A0L9URR6
LinkDB
All DBs
Position
10:10895262..10898895
Genome browser
AA seq
860 aa
AA seq
DB search
MAGSLTPGAIKEICGANCSSSLKPVLQVIDLKLVQSQQANNTERYRLILSDGSFYQQGML
ATQMNELVHSGKLQKGSVVRLTQFICNDVQNRKIIVIIDLDVVVEKCELIGEPVSLPKDG
SVESATGQSGVTPGNSQSLNNRSHSGGMAARPNMAIPSPDHPRMNAPASSVYSSISNSGS
SYSSNAPPTYPKVETGANLSRSAPFTGSHGDQNMGIRHPQSETSRPLSNSYARAPQPMYR
QPSPMYTNRGPIGKNEAAPRIIPIAALNPYQNMWTIKARVTAKGELRHYNNARGDGKVFS
FDLLDSDGGQIRATCFNSVADQFYNLIEAGKIYLVSRGSVKPAQKNFNHLPNDQELTLDM
TSIIQPCPDDDKSIPKQTFNFRPISEIESLESNAIVDMIGVVTSISPTASIMRKNGTETQ
KRTLQLKDMSGRSVELTLWGNFCNVEGQRLQTICDDGKFPVLAIKAVRINDFNGKSVGTI
MTSLLFIEPDFPEVYTLKRWFEKEGKNVPTLSISKDTSSFPKNDNRKTVSQIKDEKLGTS
EKPDWISVCATISFMKYDNFCYPGCPIMIGDRQCNKKVTNNGDGKWICDRCNQSVDACDY
RYILSFQIMDHTGVTWVTAFQESGEEIIGVPAKDLYYLKYEEQNDERFAEIIRKVLFSEY
VFKLKVKEETFSDEQRVKATVVKAEKVNFASKSRVSLELIDKLLTGKSEGATTVTNSLSG
NTGLRSVETGQVMPPAYNPIKSSTNSGRDFGMPANQVGQQYGNQYGNIASAGAPGAYTSC
TNCGGSGHTSILCPNVRNPAGQSSGGGFSNRVSYGGSGGGASGECFKCHQPGHWARDCPG
SSAATASYGSNTMQGRYGGY
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggctgggtcactgacgccaggggcgataaaagaaatatgcggtgccaattgttccagt
agtttaaaaccagtattgcaagttatagatttgaagctggtgcagtcgcaacaagccaac
aacaccgagaggtaccggttgattctttctgacggttccttttaccagcaaggcatgctc
gccacgcagatgaacgaactagttcattctggaaagttgcagaaaggttccgtcgttagg
ctcacacagttcatctgcaacgatgtccagaaccgcaagattattgtcataattgaccta
gatgttgtagtggaaaaatgtgagttgattggagaacctgtctccttaccaaaagatgga
tctgtagaatctgctactggtcaatcaggagtcacccctggaaattcacaatctttgaat
aaccgttcacactcaggcggcatggctgctagaccgaatatggccataccatctccagat
catccaagaatgaatgctcctgccagtagtgtttattctagtatttccaactctggatct
agttattctagtaatgcacctcctacatatcctaaagtagaaaccggagctaatttgtct
agatcagcaccatttactggatctcatggtgatcagaacatgggtattcgtcatccccaa
tctgagacttcaaggcccttgtcaaactcttatgctcgtgcacctcagcctatgtatcgg
caaccatctccaatgtacactaacagagggccaattggaaaaaatgaagctgcccccagg
ataattccaatagcagcattgaatccttaccagaatatgtggacgatcaaagccagggta
acagctaaaggagaactcaggcactataacaatgctcgaggtgatggcaaggtgttttca
tttgaccttttggattctgatggtgggcaaattcgggcaacttgcttcaatagtgtggct
gatcagttctataatttgattgaagctggtaagatatacctagtttccaggggaagcgta
aagccagctcagaagaatttcaatcaccttcccaatgatcaagagttaacccttgatatg
acatccatcatacaaccatgccctgatgatgataaatcaattccaaagcagacttttaat
tttcggcccattagtgaaattgaaagtttggaaagcaacgccattgtggatatgattggt
gtggtgacttcaattagtcctacagcttcaatcatgagaaaaaatggtactgaaactcag
aagagaacactccagttgaaagacatgtctggtcgaagtgttgagttaactttgtgggga
aatttttgcaacgtggaaggacaaaggctgcaaactatttgcgatgatggtaaatttcca
gttttggctataaaagctgtcagaattaacgatttcaatggaaagtctgttgggactata
atgactagcctactgttcatagagcctgattttccagaggtttacacactgaaaagatgg
tttgaaaaggaagggaagaatgtcccaactctctctatctctaaagatacatctagtttt
cctaagaatgataatcggaagactgtatctcaaattaaagacgagaagttagggacttcg
gaaaagcctgattggatatctgtctgtgcaactatttcattcatgaagtatgataacttc
tgttacccaggatgtcctatcatgataggggataggcaatgtaacaaaaaagtgactaat
aatggtgatggaaaatggatttgtgataggtgtaaccaatctgttgacgcttgtgattat
aggtacatactgtcattccagataatggatcacacaggtgtaacatgggttactgctttc
caggagagcggtgaggagatcattggcgtgcctgcaaaagatttgtattatctgaagtat
gaagagcaaaatgatgaaagatttgctgaaatcatccggaaggttctcttctccgagtat
gttttcaagttgaaagtaaaagaggaaacattcagtgatgaacaacgtgttaaggcaact
gtggttaaagcagaaaaggtaaactttgcatctaaatccagagttagtttggaattgatt
gataaactcttgactgggaaatcagaaggtgctaccaccgttaccaactcattatccggt
aatactggactgaggagtgttgaaactggtcaagtaatgccaccggcttataacccaata
aagagtagcactaatagcggtagagattttgggatgccagcaaatcaagtgggtcaacaa
tatggaaaccaatatggcaatattgcttcagcaggtgctcctggtgcatatacatcatgt
accaactgtggaggttctggtcatacttctatactttgcccaaatgttagaaatccggct
ggacagtcttcaggagggggcttttccaacagggtatcatatggtggatcaggtggtggt
gcttctggtgaatgctttaaatgccatcaacctggccactgggcaagagactgtcctggt
tccagtgcagcaactgcatcatatggaagcaatacaatgcagggaagatatggaggatat
tga
DBGET
integrated database retrieval system
