Vigna angularis (adzuki bean): 108334805
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Entry
108334805 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108334805
KO
K10756
replication factor C subunit 3/5
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03030
DNA replication
var03410
Base excision repair
var03420
Nucleotide excision repair
var03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108334805
03410 Base excision repair
108334805
03420 Nucleotide excision repair
108334805
03430 Mismatch repair
108334805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
var03032
]
108334805
03036 Chromosome and associated proteins [BR:
var03036
]
108334805
03400 DNA repair and recombination proteins [BR:
var03400
]
108334805
DNA replication proteins [BR:
var03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108334805
DNA Replication Termination Factors
ELG1-RFC complex
108334805
Chromosome and associated proteins [BR:
var03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108334805
DNA repair and recombination proteins [BR:
var03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108334805
Check point factors
HRAD17(Rad24)-RFC complex
108334805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_16
TIP49
AAA_5
Arg_tRNA_synt_N
DUF6166
Motif
Other DBs
NCBI-GeneID:
108334805
NCBI-ProteinID:
XP_052725502
LinkDB
All DBs
Position
10:7025038..7029164
Genome browser
AA seq
712 aa
AA seq
DB search
MAQSPPYYNRFPQTPNSTKKGRSGYEPSDTETEWQEIPRHERERRNFILQRNKSPMAPHR
RHPSRVEHEISSASTTSAPRRRHNSKSPYKLHVAEDVAASSSPVTGLDTRRNISPLPRPD
LGRTLSPFREQRTEKPHYKRSVTAPRLRIQESNHGGIINDTVLKQREASPFKAPSVGKIN
EMIAQVKLSNDPRSDYSSVLESTDSIQPGDLFFSRECNAYEGRNSSLPKRIQQSEYFGPM
PTVNSARTPSESKGNNGDLNMNMNMLSQSTTGLSSAATSRKGSVTGKTSSVTSEGSGKTT
ASMRKFTANRKKNQKDTWFACMRTGNCRTTRKSPERRPIDESSYIERAVVVESLPQFLAD
KHQPASLNGFICNRQEAQLLKELVSHGSCPHILLKGPSGSGKRELAMALLREIYGDACYN
LSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAPEV
SNINFKSDFKVIVLYDVHKAVDNIQHIIKWIVDRYSDICKLVLCCEDDADIIDAVKNRFK
TVQVDAPQTHEVVEVLMQIAKNEKFDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPF
SEEQPISVVWEEIVIEVATEILADPSYSRLLSVRGKFQMLLLDFVQPKLILLKLVEHLLK
RIDASLKRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMYRKNSGNRQYV
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcaccgccttattataaccgatttcctcagactccaaactcaactaagaag
ggacgtagtggctatgagccatcggacactgagaccgagtggcaagagattccacgccac
gaacgagaaagaagaaacttcattctacaacggaacaagagccccatggcaccacacagg
aggcacccttccagggttgaacatgaaatctcatcagcttcaacaacttcagctccacgt
agaagacacaatagcaaatcaccctataagctccacgtagcagaagatgttgctgcttca
tcatcgcccgtaacaggtttggatacacgaagaaatatcagtcccttgccgagacctgac
cttggaagaactttgtcccctttcagggagcaaagaactgagaagccacactacaagaga
tcagtgactgctcccaggttgaggattcaagagagcaaccatggagggataatcaatgac
actgttctaaagcaaagagaagcttctcctttcaaagcgccttcggttggaaaaatcaac
gaaatgatagcccaggtgaagctatccaatgatcccagaagtgattattcatcggtgctt
gaaagcactgattccattcaacccggtgaccttttcttttctcgtgaatgcaatgcctat
gaagggaggaattcttcgttgccgaaacgcatccaacagagtgagtatttcggtccaatg
ccaacggtgaactccgcgagaacaccatctgaaagcaaaggaaataacggtgatcttaac
atgaatatgaatatgttgtctcaatcaaccacgggtttgagttctgctgccacgagtaga
aagggaagtgtcactggtaagacaagtagtgtaacaagcgagggtagtggaaagacgacc
gcaagcatgaggaaattcacagctaacagaaaaaagaaccagaaagatacatggtttgct
tgcatgagaacaggtaactgtagaaccactagaaaatctcctgaacgtcgacccattgac
gaatcttcttacattgagagagcagtggtagtggaaagcctcccacaattcttggcagat
aagcaccaacctgcttcccttaatggcttcatttgcaacagacaagaagctcaacttctg
aaggaattggtgtctcatggctcttgccctcatattctgctcaaaggaccctctggttcc
ggaaaaagagagctagcgatggctcttcttagagaaatatatggtgatgcatgttataat
ctgtctcatgatttaagacacttccctattcaggaccaaaggcttaagaaagtctctgta
cccataacatccagtcctcatcacatggagcttgatgtaaattcagaaccaaatgctaaa
tatgctttaatgggactaatcaaagaaataagcaatatatatgctattgcccctgaagta
agcaatattaatttcaagtcagattttaaagtaatagttctttatgatgtccacaaagct
gtagataacattcagcacattatcaaatggatagtagaccgctattctgatatatgcaaa
ttagtactctgctgtgaagatgatgcagacatcattgatgctgtgaaaaatcggttcaaa
acggtacaagttgatgctcctcaaactcacgaagttgttgaggttcttatgcagatagca
aagaatgagaaatttgatctgtccatgaactttgctgcgaagattgctacaaaatctaag
cagaacctcagaaaagcaatcatggctctggaagcatgcaaagcacacaactatccattt
tcagaagaacaaccaatttcagttgtatgggaggagatcgtaatagaagttgccacagag
atcctagctgatccatcatattcacggttactctcagttcgagggaaatttcaaatgctt
ctcttggattttgtccagccgaaattgattctcctgaaactcgtagaacatctcttaaaa
agaattgatgccagcttaaagagggagctatactactggcatgcctattatgacagaaga
ctcccaccaggaataacagctttactaaagttagaagaatttgtggccaagttcatgagc
atgtacagaaaaaactctggcaatcggcaatatgtgtag
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