Vigna angularis (adzuki bean): 108335522
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Entry
108335522 CDS
T04660
Name
(RefSeq) E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
var04121
]
108335522
Enzymes [BR:
var01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108335522
Ubiquitin system [BR:
var04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108335522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-Nse
zf-RING_10
zf-RING_4
Prok-RING_4
zf-TFIIIC
zf-RING_6
RING_XB3-XBAT31
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
108335522
NCBI-ProteinID:
XP_017427041
LinkDB
All DBs
Position
10:30464184..30467354
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AA seq
175 aa
AA seq
DB search
MSSRSLRGSRQRKMLQLDLNLVPPLEDNTVQIDVDSNQNDADDDDVVELSPTSFAQTRSN
PKRRMKRRSIYDIDDETGELPKEIVIDGKVYRTVETGSSSTEENERKTPEPPKKPPALDC
PICMSAFEEPMSTRCGHIFCRCCINTAIAAQGKCPTCRKKVTKNQLIRVFLPSLS
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacgatctttgaggggaagtcgtcagagaaagatgttgcagctggacctgaac
ctggtgccaccattagaggataacactgtccaaatcgatgttgattcaaatcagaacgat
gcagatgatgacgacgtggttgaactgtcaccaacttcatttgctcagactcggagcaat
ccgaagagaaggatgaagaggaggagcatttatgatatagatgatgagactggagaattg
ccaaaagagatagtaattgacggaaaagtctatagaactgtggaaactggtagcagttct
acggaagaaaatgaaaggaaaacacctgaacctcctaagaagccgcctgcacttgactgt
ccaatatgtatgtctgcatttgaagaaccgatgtctacgaggtgtggtcatatcttttgt
aggtgttgcattaacactgcaatagctgcacagggtaaatgccctacctgcagaaagaag
gttacaaagaatcaactcataagggtgtttcttccatctcttagttaa
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