Vigna angularis (adzuki bean): 108335794
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Entry
108335794 CDS
T04660
Name
(RefSeq) vacuolar sorting protein 39
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
var
Vigna angularis (adzuki bean)
Pathway
var04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
var00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108335794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
var04131
]
108335794
Membrane trafficking [BR:
var04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108335794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
Clathrin
zf-HC5HC2H
NBAS_11th
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
108335794
NCBI-ProteinID:
XP_017427438
UniProt:
A0A8T0JKZ5
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Position
10:6763855..6772990
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AA seq
989 aa
AA seq
DB search
MVHSAYDCVELVRECSAKIESVEAYGSKLLLGCSDGSLRIFAPETEFSSDGSKSYALERN
LVGFAKKPVLSMAVVESRELLISLSESIAFHKLPSFETIAVITKAKGANIFCWDHRRGFL
CFARQKRVCIFRHDGGRGFVEVKEYGVGDTVKSMCWCGENICLGIRREYVILNASNGTLS
EVFTSGRLAPPLVVSLPTGELLLGKENIGVFVDQNGKLLPEGRICWSEAPLEVVIQKPYA
IALLPRFVEIRSLRAPYSLIQTVVLRNVRHLCQSNDSMILALDNSVHGLFPVPLGAQIVQ
LTASGNFEEALSLCKLLPPEDLSLRAAKEGSIHIRYAHYLFENGSYEEAMEHFLASQVDI
THVLSLYPSIILPTTTIVHELEKLDIYGDASYLSRASSGVSDDMEPSSTSHMLESDENAA
LESKKMNHNMLMALIKYLQKKRYSFIEKATAEGTEEVVLDAVGDNFASYNRLKKSNKGRG
SMSVSSGAREMASILDTALLQALLLTGQPSVALELLRCVNYCDLKICEEILRKDNHNVAL
LELYKHNSLHREALELLHKLVDESKSSQSKITQRFKPEDIVEYLKPLCGTDPILVLEFSM
LVLESCPSQTIELFLSGNIPADMVSSYLKKHSPTMQARYLELMLAMNENAVSGNLQNEMV
HIYLSEVLDWHAGLCAQQKWDEKDYSPTRKKLLSALETIAGYNPEALLKRLPPDALYEER
AILLGKMNQHELALSLYVHKLNAPELALSYCDRVYESMRQPSAKYSSNIYLVLLQIYLNP
RRTTAGFEKRITNLLSPQNKTIPKLTSTASMRSRARGSKKIAAIEGAEDTKVSLSSTDSG
RSDGDADEYSEGSSTTIMLDEVLDLLSRRWDRINGAQALKLLPKETKLQDLLSFLGPLLK
KSSEMYRNCSVIKSLRQSENLQVKDELYSQRKTVVKITGDSMCSLCHKKIGTSVFAVYPN
GSTLVHFVCFRDSQNMKVIGKGSQLKKRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacagcgcgtacgattgcgtggagctggtgcgtgagtgctctgccaagatcgaa
tccgtcgaagcctacggttcgaagctcctactaggttgctccgatggatcgctccgaata
ttcgcgccggaaacggaattctcctccgatgggtccaagtcctacgcgttggaaaggaac
cttgtcgggttcgcgaagaagcccgtgctatcaatggcggtggtggagtcgcgagagctc
ctcatatcactctccgaatctatcgctttccacaaactaccttccttcgagaccatcgcg
gtgatcaccaaggccaagggcgccaacatcttctgctgggaccaccgccgaggcttcctc
tgcttcgccaggcagaagcgcgtttgcatcttcagacacgatggtggcaggggatttgtg
gaggtgaaagagtatggcgtgggggatacggtgaagtccatgtgttggtgcggcgagaat
atatgtttggggattagaagagagtacgtgattctgaatgcttcgaatggaactttgtcc
gaggttttcacttcggggagactagcgcctcctctggtcgtttctcttcccactggagaa
ctccttcttggaaaggagaacattggggtttttgtggaccaaaatgggaagcttcttccc
gaaggtaggatttgctggtctgaggctcctttggaagttgtgattcagaagccgtacgct
atagctttgctgcccagatttgtggagattcgatctctccgagctccttattctttgata
cagacagttgttcttcgaaatgtccgccacctttgccagagcaatgattccatgatactt
gctttggataattcagttcatggactcttccctgttccccttggagcccagatagtccaa
ttaacagcttctggcaactttgaggaggccttgtcactgtgcaaacttcttccacctgaa
gatttaagtctccgtgctgcaaaagagggttcaattcatataagatatgctcactatctt
tttgagaatgggagctatgaagaagctatggaacattttctggcatctcaagtagatata
acccatgtgctttcactgtatccatccattattcttccaaccacaactattgttcacgag
ctagaaaagttggacatttatggggatgcttcatatctctcaagagcttcttcaggtgtg
tcagatgatatggaaccctcatcaacatctcatatgttagaatctgatgagaatgcagca
cttgaatccaagaaaatgaaccataatatgcttatggctctcataaaatacttacagaag
aagagatatagttttattgagaaggccactgctgaaggaactgaagaagtcgttttagat
gctgttggggataactttgcatcttacaacaggcttaagaaatcaaacaaggggcgtggt
agtatgtctgttagttctggagctcgggagatggcttcaatattggatactgctttactc
caagcattgcttctaactggacaaccttcagtggctttagagttactgagatgtgttaac
tactgtgatttgaaaatatgtgaagaaatacttcgaaaagacaaccacaatgttgcttta
ttagaactttacaagcacaactcattgcatcgggaggctcttgaacttcttcacaaattg
gtggatgagtcaaaatctagccagtctaaaattacacaaagattcaagcctgaggatatt
gtggagtatctcaagccactctgtgggacagaccctattcttgtactagagttctcaatg
cttgttcttgaaagctgcccatctcaaactatagagctctttctgtctggaaacattcca
gcagatatggtgagctcatatttgaagaagcattctccaaccatgcaagctaggtacttg
gagctcatgcttgcaatgaatgagaatgcggtatctggcaatttgcagaatgaaatggta
cacatatatctttctgaagtactcgattggcatgctggtttatgtgctcaacaaaaatgg
gatgagaaagattattccccaacaagaaaaaagttattgtctgccttggagaccattgca
ggatacaatccagaggctttgctaaaacgccttccaccagatgctttatatgaagagcgt
gcgatattgttgggaaaaatgaaccaacatgaattggcattatctttgtatgttcacaag
ctcaatgctccagaactagcgttgtcatattgtgatcgggtctatgagtctatgcgccag
ccatctgcaaaatattccagtaacatataccttgtgcttttgcaaatttatttgaatcct
cgaaggaccacagcaggttttgaaaagagaattacaaatctattatccccacagaataaa
accattccaaagcttacttctacggcatccatgagaagtagagctcgagggtctaagaaa
attgctgcaatagagggtgcagaggacacaaaagttagtttaagtagcactgacagtggc
aggagtgatggtgatgcagatgaatatagtgagggtagttctactactatcatgcttgat
gaggtccttgatttgttgagccgcaggtgggatagaataaatggagctcaggcccttaaa
cttctaccgaaagagacaaaattacaggacctgctctcatttcttggaccccttttgaaa
aaatcaagtgaaatgtaccgaaactgttcggtgatcaagagcttgagacaaagtgagaac
cttcaggtgaaagatgaactgtacagtcagaggaaaacggtagtcaagataaccggagat
agcatgtgctctctgtgccataagaaaatagggactagtgtttttgctgtctacccaaat
ggtagcactctcgtgcactttgtctgtttcagagattctcaaaatatgaaagtgattggc
aaagggtctcaattgaagaagcgattatga
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