KEGG   Vigna angularis (adzuki bean): 108336252
Entry
108336252         CDS       T04660                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9A
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03020  RNA polymerase
var03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108336252
  09124 Replication and repair
   03420 Nucleotide excision repair
    108336252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:var03021]
    108336252
   03400 DNA repair and recombination proteins [BR:var03400]
    108336252
Transcription machinery [BR:var03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     108336252
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108336252
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS MDD_C DUF6744
Other DBs
NCBI-GeneID: 108336252
NCBI-ProteinID: XP_017428129
UniProt: A0A8T0L6V5
LinkDB
Position
1:2977507..2982492
AA seq 114 aa
MSTLRFCGGCNNVLYPTEDKENKVLLHTCRYCNHEERADTNVVYRNKLHHSVQRRTRELE
NVAADPTLPRTKSIRCSQCNHGEAVFFKATAKGEEGSALNFVCCNPTCGNRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtacactgagattttgcggtggatgcaacaatgttctataccctacagaggacaag
gaaaacaaggttcttctccacacttgccgctactgcaatcatgaggagcgtgcagatact
aacgttgtctatagaaataagttacatcactctgttcaaaggcgcactcgagagctggaa
aatgtagctgcagatccaacacttcctcgcaccaagtctattcgctgctctcaatgcaac
catggagaagctgtctttttcaaggcaacggccaaaggggaagaaggctcggcactcaat
tttgtttgctgcaacccaacttgtggcaaccgttggagagagtag

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