Vigna angularis (adzuki bean): 108336301
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Entry
108336301 CDS
T04660
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
var03021
]
108336301
Transcription machinery [BR:
var03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
108336301
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF3263
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
108336301
NCBI-ProteinID:
XP_017428198
UniProt:
A0A0L9V0X9
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Position
7:5971511..5976979
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AA seq
511 aa
AA seq
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MGVVTVSTSAARTPLRLSTKFISRQQAHKRLLIVAFKGNKSNKTTLVSPQEQIPLPVETA
KKQRKRIEKSNESLKRVRAVSTDETSPFTMVVDYNEAAAKLENIYKLSSVSDTCETEDID
SKTTRVFRRRKKVGDEHDDRNDDHVVRNLNKKAKRLSLDKRISLKRNAKEKVIVQAQKKR
DVNKVEKIDALIREYSASTDLVSMDWKKMKIPPVLPSSEHAWLFKLMEPMKSLLQMREDL
QEAGKEISDGELADANSTSIVQVRKAIEIGQAARNKLIKHNLRLVLFVINKYFQDFASGP
RFQDLCQAGVKGLITAIDRFESKRRLQLSTYGLFWIRHSIVRSITLSSFTRVPFGLDRVR
ADIHRAKLELTFEHQRSPTEEEVLKRIGISPERYYDVLKASKPILSLHSRHITTQEEFIN
GITDLDGVDADNRRQVAVLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEIAGNLN
ISREMVRKHEVKALMKLKHPARLDYLRRYVV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttactgtttctacctcagctgctaggactccattaagattgagtacaaag
tttatcagtcgtcagcaggcacataaacgactcttaattgtagcttttaaaggaaataaa
tcgaataaaaccactttggtttcacctcaggagcaaattcctctacccgtggaaacggca
aagaaacaaaggaaaaggatagaaaagagtaatgagtcgctgaagagagtgagagctgtc
tctactgatgaaacctctccattcaccatggttgtggactacaatgaagctgcagccaaa
cttgaaaatatatataaactcagctccgtatctgatacttgtgagacggaagatatagat
agtaaaaccacgagagtattccggaggaggaagaaggttggtgatgaacatgatgacaga
aatgatgatcatgtggttagaaacctgaataagaaggccaaacgattgagtcttgataaa
aggatttcattgaaaaggaatgcaaaggagaaggtaattgttcaagctcagaaaaaaaga
gatgttaataaagtagagaaaattgatgcgcttatcagggagtattcagcatcaactgat
ttagttagcatggactggaagaaaatgaaaattccgccagttcttccttcttcagaacat
gcatggttatttaagttgatggaacctatgaagtcactcctacaaatgagagaagattta
caggaagcagggaaagaaatttcggatggtgaactagcagatgcaaatagcactagcatt
gttcaagtaaggaaagctatagaaattggtcaagctgcgagaaacaagctcataaagcac
aatctccgacttgtattgttcgtgattaacaaatattttcaagattttgcaagtggccca
aggtttcaagatctttgtcaggctggagttaagggacttatcactgcaattgatcgattt
gagtcaaaaaggagacttcagctatctacatacggtctattttggattagacattcaatt
gttcgttccataaccctctcaagcttcacacgtgttccttttggacttgacagggtcaga
gcagatattcatagagcaaaactcgagttaacatttgagcaccagaggtcaccaacggaa
gaggaggtattaaaaagaattgggatctcccctgaacgatattatgatgtactgaaggca
tcaaaacccattctatccctgcattcaagacatataaccacgcaggaagagtttattaat
gggattactgatcttgatggtgtggatgctgataataggaggcaagttgctgttctaaga
cttgctcttgatgacgtgcttgattccttgaagccaaaggaaagcttagtgattagacag
agatatggacttgatggcaagggtgacagaaccttgggagaaatcgctgggaacttgaat
atttcaagggaaatggttcggaagcatgaagtcaaggctctcatgaagcttaagcaccct
gctcggttggattatctccgtcgctatgttgtatag
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