KEGG   Vigna angularis (adzuki bean): 108336320
Entry
108336320         CDS       T04660                                 
Name
(RefSeq) THO complex subunit 5B
  KO
K13174  THO complex subunit 5
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03013  Nucleocytoplasmic transport
var03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108336320
  09122 Translation
   03013 Nucleocytoplasmic transport
    108336320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:var03019]
    108336320
   03041 Spliceosome [BR:var03041]
    108336320
Messenger RNA biogenesis [BR:var03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108336320
Spliceosome [BR:var03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108336320
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 108336320
NCBI-ProteinID: XP_017428224
LinkDB
Position
7:15447098..15450504
AA seq 502 aa
MEDGETTEEVVAVPVSNSEGVGDEQMFPHSPRQRDSDEESPQKSLRKTKASIENIVAEIL
ALKKQAEPKPLLTLRLRELLTQTFLHFVTLRQANRSILLEEERARTETERAKAPLELTTQ
QLQNLIYEKSHYVKAIKACNDFKSKYPDIELVSEGEFFRDSPQGMKDSVLCSHSEHNLVL
KRLNFELFQRKELCKLHDKLEQKKKTLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLG
VQHTKKLKRHHSAELLPPPLYVIYSQLLAQKEAFGESIDVEIVGSVKDAQSFAHIQAHKD
TGISTTVASPKLENDEPDEDGQRPSKRPRRFQGKESLDQVGIFQVHPLTVNLHIYDDEVS
DLESANLVTLNFEYMMQLNIICVGIKASIDGPENDILSNLFPDDTGLELPHQSAMLYVGD
AVMLFNCDRTSRPYKWAQHLAGIDFLPEVAPLLLARRETPDGGEGAKGEDFVPSISQYRQ
HNRLQTVLQKIRSRIKARLVLQ
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggaagacggcgaaacgacggaggaggtggttgccgttccggtttcaaatagcgagggc
gtcggtgacgagcaaatgtttccgcattcccctcgacaacgcgattcggacgaggagtct
ccgcaaaaatcgttgcgtaaaacgaaagcttcaatagaaaacatcgtcgccgagattctc
gctctgaagaaacaggccgaacccaaaccactcctcactctccgactcagagagctcctc
actcaaacgttccttcatttcgtcactcttcgccaggccaatcgctccatcttgttggag
gaggagcgtgcgagaacggaaactgagcgtgcgaaggcgcctctggaactcaccacgcag
cagcttcagaacctgatctacgagaagagtcactacgtgaaggcaataaaggcgtgtaac
gatttcaagtccaagtatcctgatattgagctggtgtcggagggagagttttttcgtgac
tcgccgcagggtatgaaggactccgttttgtgtagtcacagtgaacataatctcgtgctg
aagagactcaattttgagttgtttcagcgcaaggagctttgcaagcttcatgacaaactg
gagcagaaaaagaaaactcttttggagacaattgcaaaccgaaagaagttcttgtctagc
ctcccttcacatctcaagtctctcaagaaagcatccttgccagtgcaaaatcaactagga
gttcagcatactaagaaactaaagcggcatcactcagcagagttgcttccaccacctctt
tatgtgatttactcacagctgttggctcaaaaggaggcgtttggagaatctattgatgtg
gagattgtaggaagtgtcaaagatgctcaatcttttgcccacattcaagctcacaaggac
actggcatttccactactgtagcgagtccgaaattggaaaatgatgaacctgatgaagat
ggtcagagaccgagtaaaaggccaaggaggtttcaaggcaaggagagccttgaccaagta
ggaatatttcaagttcacccacttacagtcaatctccatatttatgatgacgaagtctct
gatttagagtctgcaaacctcgttactctaaattttgagtacatgatgcagttgaatatt
atatgtgtcgggatcaaagcatctattgatggtcctgagaatgacatcttaagcaatttg
ttccctgatgacacaggtctcgagcttcctcaccagtcggctatgctctatgttggggat
gctgtaatgttgtttaattgcgatagaacttcacgtccttacaaatgggctcagcacctg
gctggtattgatttcttgcccgaggtggctccattgctgcttgctagacgtgaaactcca
gacggtggtgaaggagccaaaggtgaagatttcgtaccgagcatttcacaatatcgccag
cataaccgattgcagacagttctgcagaaaattcgttcaaggataaaagcacgtttggtt
cttcaataa

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