Vigna angularis (adzuki bean): 108336439
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Entry
108336439 CDS
T04660
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
var03016
]
108336439
Enzymes [BR:
var01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
108336439
Transfer RNA biogenesis [BR:
var03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
108336439
Prokaryotic type
108336439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
108336439
NCBI-ProteinID:
XP_017428380
LinkDB
All DBs
Position
7:28529259..28533560
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AA seq
499 aa
AA seq
DB search
MWSAKMASWLRVPLFPLLRKAPFRVSPAFGKNKRRTRFHACCCSTSSQSWQPSRKKKVVM
RVAYVGTNYRGLQMQHDEHFLSTIEKELETAVFKAGGIRESNFGDLQKIRWARSSRTDKG
VHSLATIVSFKMEIPENAWNGDPHGFALANYVNSYLPFDIKVLSILPSQRSFDPRKECVL
RKYSYLLPAEIVGIQSHSSNDEIDYHISEFHDILNVFEGEHPFHNYTARSKYRKHSPKRQ
LSSKSVERLPLNESECEYIDEEENFENDKAFTENMECQSQKCSEAHNFGKPVGGSNNKNG
NRLPGQDSRLVAHARWLYEPDEADRLSASHFRKVFQCSCGKLETSLGHNYIEISIQGESF
MLHQIRKMVGTAVAVKRKVLPKDIIKLSLARFSRIILPLAPSEVLILRGNRFSIRTRPGN
ETRPEMLTIVESKEINKAVDDFYKSVMLPQVSKFLDPLRSPWEEWIEKLDAHTSIPNDQL
DEVRKAWTSLQENLENRTN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtgcgaagatggctagttggttgcgagtgccattgtttcctttgctcaggaaa
gctccctttagagtatcacccgcttttgggaagaataagagaaggacacgattccatgct
tgttgttgttctacttcttcccagtcatggcaaccttctcggaaaaaaaaggttgtaatg
cgcgttgcatatgttggcaccaattaccgaggtctccaaatgcaacacgatgaacatttt
ctctccactattgagaaagaactagaaactgccgtattcaaggctggtggcattcgcgaa
agtaattttggggatctgcagaagattagatgggctagaagcagccggactgacaaagga
gttcactctcttgcaacgatcgtatcctttaaaatggaaatcccggaaaatgcttggaat
ggagacccccatggctttgcccttgcaaattatgttaactcttatcttccctttgatata
aaagttttaagcattttgccctcacaaaggagctttgatcccaggaaggaatgtgttttg
cgaaagtactcctaccttcttcctgctgaaattgttggtattcaaagccattccagcaat
gatgaaattgattaccacatatcagagttccatgatattctcaatgtatttgagggggaa
catcctttccataactacacggctaggtcaaagtacaggaaacattctcctaaaaggcaa
ttgtcatcaaagagtgtagagaggttgccactgaatgagtctgaatgtgagtacattgat
gaggaagaaaattttgaaaatgacaaggcatttacagaaaatatggagtgtcaaagccag
aagtgttcagaagctcataattttggtaaacctgttggtggctctaacaataagaatgga
aatagattgcctggccaagactctagattggttgctcatgctagatggttatatgaaccc
gatgaagcagacagattaagtgcttcccatttcagaaaagtttttcagtgttcttgtgga
aagctggaaacatcactgggacataattacatagagatatccatacagggagagtccttc
atgttgcatcagataagaaaaatggttgggacagcagtggcagtaaaacgcaaggtactg
ccaaaggatattataaagctatcactggcaaggttctctcgaattatactaccccttgca
ccttcagaagttctaatattaaggggaaacagattctcaataagaacacgaccaggaaat
gagacaaggcctgaaatgctgacaatagtcgaatcaaaagaaattaacaaggcagtggat
gacttttacaaatcagttatgctacctcaagtttcaaaatttttggacccattaagatct
ccctgggaagagtggattgagaaactggatgctcacacaagcataccaaatgatcagttg
gacgaggtcaggaaggcttggacttcgttacaagaaaatcttgaaaatagaacgaactag
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