Vigna angularis (adzuki bean): 108336524
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Entry
108336524 CDS
T04660
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like
KO
K27807
short internodes/stylish family transcription factor
Organism
var
Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:
var00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
var03000
]
108336524
Transcription factors [BR:
var03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108336524
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Gene cluster
GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
108336524
NCBI-ProteinID:
XP_017428493
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Position
7:21664520..21666476
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AA seq
473 aa
AA seq
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YIYIHTHTHKHHIPITYYKIYVSSSSIVLCFPHTIHPTFIKSTRKLYLVFYFIVFDLRNQ
ALSVVATTRRLPSDSGAFADWAATGSSAAAAAAGGRAVPVDDLSLGFNAGPAAPAAATGP
TSGMWSGANRSINYPEMGMFVVAPASSFHHHHHQQQPPHDPVMADSLNPATALGVGVIPL
LAATPCLESDNFLGNRPRGGGIQFWQDQGPHQSHYMKKQQQQGLLDQSNTSSGNLVQTSG
GLTASGTSSGGTTTCQDCGNQAKKDCTNRRCRTCCKSRGFDCPTHVKSTWVPAARRRERQ
LMTAATAAVAGSSGSTSGTKKPRLIASQTTTTSHTSTSNTTPPRSFDTSSSHQDAGFKES
LPGQVRAPAVFKCVRVTAVEDGQDEYAYQAVVKIGGHVFKGFLYDQGVENRDVYPNLSEL
HLGGGNGGSGSGGSGGVGRNGVSSSPMMDPSDVYAGSGGGLLGGSSAYGNPMN
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
tatatatatatacacacacacacacacaaacaccacatacctattacctattacaagatc
tatgtttcatcttcttcaatagttctgtgttttccacacaccatacatcctaccttcatc
aaaagtacaaggaaactctatcttgttttttattttattgtttttgatctgagaaatcaa
gcactttcagttgtggctactacaaggaggttaccttcagattctggtgcctttgcggac
tgggcagcgactggttcttccgctgctgctgctgctgccggtggccgtgctgtccccgtg
gacgacctctcccttggtttcaatgctggtcctgccgccccagcagcagccaccggaccc
accagcggaatgtggtccggtgccaataggtcgatcaattaccccgaaatgggaatgttc
gtggtggcgccagcctcctccttccaccatcaccaccaccagcaacagcccccgcacgac
cccgtcatggcagattccctcaacccagccactgcactcggcgtcggcgtcatccctctt
cttgccgccacgccgtgtctggaatccgacaacttcctcggaaacaggccacgtggtggg
ggaattcagttttggcaagaccaagggccccatcagagccactacatgaagaagcaacag
cagcaggggcttctcgaccaaagtaacaccagttctggaaacttggttcaaaccagtggc
ggcttaactgcttcgggtaccagtagtggaggaactactacgtgccaagattgcggaaac
caggccaagaaagattgtaccaatagaaggtgtaggacttgctgcaaaagtcgaggtttc
gattgccctacccatgttaagagcacatgggttcccgccgcacgccggagagagcgccag
ctcatgactgcggccactgcggcggtagctggttccagtggctccacctccgggactaaa
aaacctaggctcattgcttcacaaaccactacaacatctcacacttccacttctaacacc
acccctcccagaagctttgacacaagctctagccatcaagatgcgggcttcaaggagtca
ttacctgggcaagtacgtgcaccggcggttttcaagtgtgttagagtgacggcggtggag
gatgggcaagatgagtacgcgtaccaggctgtggtgaagattggtgggcacgtgttcaaa
gggtttctgtatgatcaaggggtggagaatagggatgtgtatccaaacctatctgagttg
catttgggtggtggaaatggcggaagtggaagcggagggagtggtggggtggggagaaat
ggggtgtcttcttctccgatgatggatccttctgatgtttatgcaggttcgggtggaggg
ttacttgggggttcttctgcttatggtaatccaatgaattga
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