Vigna angularis (adzuki bean): 108337367
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Entry
108337367 CDS
T04660
Name
(RefSeq) THO complex subunit 4B
KO
K12881
THO complex subunit 4
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03013
Nucleocytoplasmic transport
var03015
mRNA surveillance pathway
var03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108337367
09122 Translation
03013 Nucleocytoplasmic transport
108337367
03015 mRNA surveillance pathway
108337367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108337367
03041 Spliceosome [BR:
var03041
]
108337367
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108337367
TREX complex
108337367
Spliceosome [BR:
var03041
]
Complex C
Other components
EJC/TREX
108337367
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108337367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
MetW
Motif
Other DBs
NCBI-GeneID:
108337367
NCBI-ProteinID:
XP_017429372
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All DBs
Position
2:complement(1334294..1336666)
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AA seq
257 aa
AA seq
DB search
MVSGIDMSLDDIMRYSAKAAASRRLYTFVRNPVRTTPYPVPLARYHGMIPEMDFEDDGAA
MIESGTKLLISNLDLGVSNGDIKLLFSEEGELKRCSIHYDQNGRSKGTAEVVFMRHSDAL
SAINKYNNMRLDGKPLQIELVGTSSPVVSSLRQNSLLGRPNDSLLSKGERVGGRGFYNDF
VQEYIPRVRGEENGYIRELYLTDMDDALERPHRVPRYHAKVKSSNRKVTAKDLDDDLERY
HLEAKRIKEQNGKSDNH
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcattgacatgtcactcgacgacattatgaggtactccgccaaggcggcg
gcgtctcgccggctatacacatttgttcgcaacccggtcagaacgacgccgtatcccgtt
ccgctggcaaggtatcacggaatgattccagaaatggattttgaagatgacggtgccgct
atgatcgaaagcggaaccaaactcttgatatctaacttggatcttggagtttcaaacggt
gatataaagctgctgttttcggaagagggtgaattgaaaagatgctccattcattatgat
cagaacgggagatcaaagggaacagcagaagttgtgtttatgagacactctgatgcttta
tcagccatcaataaatacaacaatatgaggcttgatggtaaaccattgcaaattgagcta
gttggaactagtagtcctgttgtttcctctcttcgtcaaaatagcttactgggaagacca
aatgattcacttctaagcaaaggagaaagagttggaggtagggggttctacaacgacttt
gtacaggagtacattccaagggtccgtggagaagagaatggatatattcgagagttatat
ttaacagatatggatgatgctttggagaggcctcaccgcgttccgagataccacgcaaaa
gtaaagagcagtaatagaaaagtaactgctaaagatcttgatgatgatttggagaggtat
cacctagaggctaagcggataaaagaacaaaatggaaagtcagataatcattga
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