Vigna angularis (adzuki bean): 108337855
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Entry
108337855 CDS
T04660
Name
(RefSeq) uncharacterized protein LOC108337855
KO
K12589
exosome complex component RRP42
Organism
var
Vigna angularis (adzuki bean)
Pathway
var03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
var00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108337855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
var03019
]
108337855
Messenger RNA biogenesis [BR:
var03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
108337855
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
108337855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
108337855
NCBI-ProteinID:
XP_017429946
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All DBs
Position
7:complement(18455979..18461862)
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AA seq
286 aa
AA seq
DB search
MVGLSLGEKHFIQGGIAHDLRCDGRKRLTYRPILVETGVIPQANGSARVRMGATDVIASI
KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQDCLLGGKSGAGA
GVDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALCNTGIPRVQVAAGASND
EQPEVDVSDEEFLQFDTSGVPVIVTLTKIGRHYIVDATSEEESQMNSAVSISVNRQGHIC
GITKRGGVGLDPSIILDMISVAKHVSEQLMNKLDSEIASAEAEDES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtttatctctcggagaaaaacatttcatacaaggtggcattgctcatgatctt
cgatgtgatggtagaaagagattgacatatcgaccaatcttggttgaaactggagtgatt
ccccaggcaaatggttcagctcgagtcagaatgggtgccacagatgtcattgccagtatt
aaggctgaacttggaaagccaagcttgttgcaacctgacaaaggaaaagtctctatatat
attgattgcagttcgactgcagagccagcctttgagggtagagggggtgatgaattggca
gcagagctgtcaaatgctcttcaagactgtctcttgggtggtaaaagtggagcaggtgct
ggagttgacctttcatcacttattgtggttgaaggaaaaatttgttgggatctttacatt
gatgggcttgttgttagttcagatggaaatttgttggatgctctaggcgctgccattaag
gctgctttgtgcaatacaggtattccaagagtccaagttgctgctggagcatccaacgat
gagcaaccagaagttgatgtaagcgacgaggagtttctgcagtttgacacatctggagtc
cctgttatagttacactaactaagattgggaggcactatattgtggatgcaacgtcagaa
gaggaatcacaaatgaactctgccgtttccatctctgttaataggcaagggcacatctgt
ggcataaccaaacgaggaggtgtagggctggatccaagcatcattcttgatatgatatct
gttgccaagcatgtaagcgagcaattaatgaacaaattggattcagaaattgcttctgct
gaagctgaagacgagtcatga
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